Resource

Id Histone_ChIP-seq/ENCSR758KRKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR758KRK [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR758KRK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (54 years)
  • date_created: 2017-12-06T21:18:27.649774+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR758KRK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR758KRK float

Histone_ChIP-seq_ENCSR758KRK
Histone_ChIP-seq ENCSR758KRK [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR758KRK [1.58, 67]
n
61,823,648
mean
11.9
sd
9.13

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 618236481.92% 42122
chr1 6427283 2.58% 4288
chr1_KI270713v1_random 674 1.65% 1
chr2 4527433 1.87% 3155
chr3 3374113 1.70% 2445
chr4 2027403 1.07% 1494
chr5 2815807 1.55% 1971
chr6 3395155 1.99% 2359
chr7 2700025 1.69% 1888
chr8 2232195 1.54% 1610
chr9 2754663 1.99% 1914
chr10 2861579 2.14% 1937
chr11 3485860 2.58% 2261
chr12 3188950 2.39% 2131
chr13 1079967 0.94% 783
chr14 2335326 2.18% 1531
chr15 2072477 2.03% 1417
chr16 2555420 2.83% 1785
chr17 3888835 4.67% 2463
chr17_GL000205v2_random 1028 0.55% 2
chr18 1053816 1.31% 739
chr19 3484506 5.94% 2154
chr20 1784969 2.77% 1208
chr21 744136 1.59% 515
chr22 1692846 3.33% 1106
chrUn_GL000195v1 386 0.21% 1
chrUn_GL000219v1 1718 0.96% 2
chrUn_KI270438v1 556 0.49% 1
chrUn_KI270467v1 1526 38.93% 1
chrX 1288663 0.83% 932
chrY 46333 0.08% 28
3336 contigs with no values (128372230 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42122 240 21678 1467.73 1084
global segment-length histogram

Files

Filename Size md5
ENCFF064XZZ.bed.gz 1.05 MB 47496592e273907d774b8757f2a9c25d
ENCFF064XZZ.tabix.bed.gz 471.96 KB 6ff471fda12b5b23469b5a5b4f3f3967
ENCFF064XZZ.tabix.bed.gz.tbi 182.46 KB de82f71e015525f87287cf1bd6d4d2c2
genomic_resource.yaml 1.51 KB 5c19ddc8f95317c037b626fbcdd178d5
statistics/