Resource

Id Histone_ChIP-seq/ENCSR756RGWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR756RGW [biosample_summary="Homo sapiens muscle layer of colon tissue female adult (77 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR756RGW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0012489/
  • biosample_summary: Homo sapiens muscle layer of colon tissue female adult (77 years)
  • date_created: 2015-09-15T19:52:39.776339+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR756RGW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (77 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR756RGW float

Histone_ChIP-seq_ENCSR756RGW
Histone_ChIP-seq ENCSR756RGW [biosample_summary="Homo sapiens muscle layer of colon tissue female adult (77 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR756RGW [1.83, 23.9]
n
26,460,687
mean
6.85
sd
2.88

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 264606870.82% 25688
chr1 2868732 1.15% 2682
chr2 1902276 0.79% 1816
chr3 1595036 0.80% 1550
chr4 1042707 0.55% 977
chr5 1190847 0.66% 1124
chr6 1446062 0.85% 1349
chr7 1147622 0.72% 1142
chr8 876249 0.60% 885
chr9 1236471 0.89% 1196
chr10 1271578 0.95% 1265
chr11 1535285 1.14% 1467
chr12 1507200 1.13% 1411
chr13 499156 0.44% 504
chr14 941615 0.88% 909
chr15 874297 0.86% 833
chr16 1000171 1.11% 1027
chr17 1579656 1.90% 1547
chr18 386464 0.48% 387
chr19 1518951 2.59% 1504
chr20 689350 1.07% 704
chr21 222926 0.48% 229
chr22 641746 1.26% 629
chrX 486290 0.31% 551
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25688 260 10216 1030.08 845
global segment-length histogram

Files

Filename Size md5
ENCFF794NFQ.bed.gz 602.29 KB bac397da84a86423484f18708929459b
ENCFF794NFQ.tabix.bed.gz 278.76 KB ce2c3a0d1da9dcabc2687605b0921745
ENCFF794NFQ.tabix.bed.gz.tbi 125.63 KB 63050996d67a1d6bd97533e0d784b685
genomic_resource.yaml 1.54 KB fbd99c36dea26d12ff5f25787e0f2717
statistics/