Resource

Id Histone_ChIP-seq/ENCSR751GUMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR751GUM [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR751GUM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female child (16 years)
  • date_created: 2021-01-28T22:01:52.657255+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR751GUM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR751GUM float

Histone_ChIP-seq_ENCSR751GUM
Histone_ChIP-seq ENCSR751GUM [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR751GUM [1.76, 21.8]
n
21,930,081
mean
9.46
sd
3.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 219300810.68% 19148
chr1 2185938 0.88% 1883
chr2 1546312 0.64% 1310
chr3 1280827 0.65% 1049
chr4 875333 0.46% 727
chr5 1028796 0.57% 835
chr6 1271888 0.74% 1085
chr7 1068088 0.67% 967
chr8 839069 0.58% 711
chr9 912732 0.66% 823
chr10 958902 0.72% 798
chr11 1198847 0.89% 1053
chr12 1142125 0.86% 972
chr13 449184 0.39% 366
chr14 748136 0.70% 650
chr15 735485 0.72% 629
chr16 900866 1.00% 799
chr17 1255563 1.51% 1116
chr18 371844 0.46% 328
chr19 1398029 2.38% 1354
chr20 559673 0.87% 494
chr21 198437 0.42% 182
chr22 471506 0.93% 438
chrX 532501 0.34% 579
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19148 210 8249 1145.29 1031
global segment-length histogram

Files

Filename Size md5
ENCFF024PGQ.bed.gz 448.43 KB d6da3cae00b4f5e8a1482ceedd23cbfb
ENCFF024PGQ.tabix.bed.gz 210.1 KB afce9207888e86528919d72bc9718634
ENCFF024PGQ.tabix.bed.gz.tbi 126.18 KB 9eb5186b7bf82ab0492272a011d15f9b
genomic_resource.yaml 1.5 KB 12196d2483075cbc6a3829d979bfddb8
statistics/