Resource

Id Histone_ChIP-seq/ENCSR751BHOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR751BHO [biosample_summary="Homo sapiens stomach tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR751BHO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue female adult (51 years)
  • date_created: 2018-10-31T03:01:36.399539+00:00
  • date_released: 2018-12-14
  • doi: 10.17989/ENCSR751BHO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR751BHO float

Histone_ChIP-seq_ENCSR751BHO
Histone_ChIP-seq ENCSR751BHO [biosample_summary="Homo sapiens stomach tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR751BHO [1.8, 83.4]
n
151,360,155
mean
18.3
sd
16.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1513601554.70% 77739
chr1 15711764 6.31% 7714
chr1_KI270713v1_random 1925 4.72% 4
chr1_KI270714v1_random 348 0.83% 1
chr2 11564735 4.77% 6196
chr3 9546598 4.81% 5030
chr4 5761633 3.03% 3313
chr5 7232554 3.98% 3927
chr6 7530255 4.41% 4276
chr7 6776734 4.25% 3664
chr8 6044344 4.16% 3323
chr9 7390493 5.34% 3673
chr10 7902320 5.91% 4020
chr11 8337878 6.17% 3997
chr12 7459778 5.60% 3846
chr13 3210518 2.81% 1775
chr14 5316292 4.97% 2633
chr15 5201048 5.10% 2705
chr16 5969010 6.61% 2936
chr17 8633886 10.37% 3925
chr17_GL000205v2_random 1748 0.94% 2
chr18 2600724 3.24% 1443
chr19 6451417 11.01% 2805
chr20 4326236 6.71% 2197
chr21 1846353 3.95% 1032
chr22 3954305 7.78% 1801
chrUn_GL000195v1 5616 3.07% 5
chrUn_GL000218v1 249 0.15% 1
chrUn_GL000219v1 1507 0.84% 1
chrX 2579887 1.65% 1494
3337 contigs with no values (185513206 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77739 225 167662 1947.03 1219
global segment-length histogram

Files

Filename Size md5
ENCFF717ERY.bed.gz 1.84 MB d782f07131ed183824d9cea9f3aacaec
ENCFF717ERY.tabix.bed.gz 847.73 KB cb25230b043fa9b073931b3462eb3b3b
ENCFF717ERY.tabix.bed.gz.tbi 236.72 KB be024d2463bfa7f1ec212341cb3518f8
genomic_resource.yaml 1.5 KB 75703dc6506dabfc27da16b5486a77b1
statistics/