Resource

Id Histone_ChIP-seq/ENCSR749ABBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR749ABB [biosample_summary="Homo sapiens transverse colon tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR749ABB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue male adult (37 years)
  • date_created: 2017-07-28T10:07:33.243457+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR749ABB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR749ABB float

Histone_ChIP-seq_ENCSR749ABB
Histone_ChIP-seq ENCSR749ABB [biosample_summary="Homo sapiens transverse colon tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR749ABB [2, 10.5]
n
851,068
mean
3.62
sd
0.687

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8510680.03% 3128
chr1 69604 0.03% 274
chr2 63913 0.03% 255
chr3 50216 0.03% 197
chr4 43048 0.02% 175
chr5 44926 0.02% 177
chr6 41597 0.02% 156
chr7 31776 0.02% 116
chr8 19792 0.01% 74
chr9 34323 0.02% 125
chr10 36987 0.03% 139
chr11 36182 0.03% 133
chr12 53109 0.04% 186
chr13 14767 0.01% 59
chr14 30681 0.03% 123
chr14_KI270725v1_random 519 0.30% 1
chr15 36582 0.04% 139
chr16 26633 0.03% 93
chr17 28491 0.03% 111
chr17_GL000205v2_random 341 0.18% 1
chr18 19901 0.02% 78
chr19 119195 0.20% 319
chr20 18884 0.03% 75
chr21 12255 0.03% 51
chr22 7881 0.02% 33
chr22_KI270732v1_random 612 1.47% 2
chr22_KI270733v1_random 3762 2.09% 16
chr22_KI270735v1_random 188 0.44% 1
chrUn_GL000195v1 1412 0.77% 2
chrUn_GL000220v1 287 0.18% 2
chrUn_GL000224v1 407 0.23% 2
chrUn_KI270435v1 401 0.43% 1
chrUn_KI270442v1 349 0.09% 2
chrUn_KI270507v1 195 3.64% 1
chrUn_KI270509v1 216 9.32% 1
chrUn_KI270591v1 179 3.09% 1
chrUn_KI270746v1 273 0.41% 1
chrUn_KI270751v1 706 0.47% 3
chrUn_KI270757v1 162 0.23% 1
chrX 316 <0.01% 2
3327 contigs with no values (184370592 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3128 115 1828 272.08 235
global segment-length histogram

Files

Filename Size md5
ENCFF243VDO.bed.gz 57.29 KB d75238730e8080ebda30c44a5352cf8a
ENCFF243VDO.tabix.bed.gz 30.91 KB 8a52dffbc2ff02bd12248d30a0371a6d
ENCFF243VDO.tabix.bed.gz.tbi 31.68 KB fc45122039d153e23f8eec2c095c52d1
genomic_resource.yaml 1.51 KB 4cf77ac4bbaf993353e854f9daf6f9ab
statistics/