Resource

Id Histone_ChIP-seq/ENCSR748TFFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR748TFF [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR748TFF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001150/
  • biosample_summary: Homo sapiens body of pancreas tissue female adult (53 years)
  • date_created: 2016-10-19T23:20:10.412306+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR748TFF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR748TFF float

Histone_ChIP-seq_ENCSR748TFF
Histone_ChIP-seq ENCSR748TFF [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR748TFF [1.75, 45.2]
n
40,718,613
mean
10.2
sd
6.14

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 407186131.27% 40730
chr1 4519699 1.82% 4444
chr2 2888244 1.19% 2958
chr3 2350833 1.19% 2372
chr4 1469783 0.77% 1547
chr5 1763915 0.97% 1810
chr6 2081578 1.22% 2165
chr7 1906699 1.20% 1951
chr8 1706947 1.18% 1739
chr9 1931081 1.40% 1853
chr10 1967165 1.47% 1983
chr11 2284011 1.69% 2137
chr12 1934993 1.45% 1981
chr13 831239 0.73% 892
chr14 1526365 1.43% 1463
chr15 1474068 1.45% 1462
chr16 1697949 1.88% 1693
chr17 2373832 2.85% 2180
chr18 694381 0.86% 719
chr19 2009294 3.43% 1965
chr20 1092969 1.70% 1120
chr21 405694 0.87% 445
chr22 1145739 2.25% 1049
chrX 662135 0.42% 802
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40730 190 17738 999.72 739
global segment-length histogram

Files

Filename Size md5
ENCFF271OHD.bed.gz 928.56 KB b86881805bebea924ecf5bb3e7630a33
ENCFF271OHD.tabix.bed.gz 433.84 KB e2e09e07787a13a6b48ab318b60db78b
ENCFF271OHD.tabix.bed.gz.tbi 172.55 KB e959eb404168bb50dd19b0e64af1e6df
genomic_resource.yaml 1.74 KB a4b7a1077c711b21c6e00737ab154a8e
statistics/