Resource

Id Histone_ChIP-seq/ENCSR747JSAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR747JSA [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR747JSA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (59 years)
  • date_created: 2020-05-01T03:02:30.390851+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR747JSA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR747JSA float

Histone_ChIP-seq_ENCSR747JSA
Histone_ChIP-seq ENCSR747JSA [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR747JSA [1.79, 5.46]
n
1,413,106
mean
3.3
sd
0.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 14131060.04% 2966
chr1 106021 0.04% 236
chr2 137700 0.06% 268
chr3 51612 0.03% 111
chr4 57519 0.03% 132
chr5 93083 0.05% 189
chr6 95256 0.06% 196
chr7 99207 0.06% 190
chr8 58604 0.04% 125
chr9 67819 0.05% 135
chr10 82894 0.06% 160
chr11 51595 0.04% 124
chr12 55858 0.04% 123
chr13 46825 0.04% 93
chr14 40640 0.04% 84
chr15 44264 0.04% 87
chr16 42384 0.05% 94
chr17 97163 0.12% 197
chr18 23397 0.03% 50
chr19 70253 0.12% 156
chr20 43009 0.07% 98
chr21 12838 0.03% 23
chr22 13573 0.03% 32
chrX 21592 0.01% 63
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2966 215 4081 476.43 397
global segment-length histogram

Files

Filename Size md5
ENCFF867NGE.bed.gz 49.09 KB 3f8f28a25cc2c24567cd9513c13c39e5
ENCFF867NGE.tabix.bed.gz 28.19 KB fb955e513c0c09fdf6cbba367cc61705
ENCFF867NGE.tabix.bed.gz.tbi 22.66 KB 16178441f42c782386346af58e845858
genomic_resource.yaml 1.71 KB 4e87e50510a7a9ee8905ff447cb3ce63
statistics/