Resource

Id Histone_ChIP-seq/ENCSR746QFIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR746QFI [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR746QFI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000320/
  • biosample_summary: Homo sapiens duodenal mucosa tissue male adult (59 years)
  • date_created: 2015-09-15T19:51:49.164975+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR746QFI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR746QFI float

Histone_ChIP-seq_ENCSR746QFI
Histone_ChIP-seq ENCSR746QFI [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR746QFI [1.55, 16.1]
n
27,406,878
mean
5.14
sd
1.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 274068780.85% 40071
chr1 1220234 0.49% 1812
chr2 1610835 0.67% 2543
chr3 1261604 0.64% 2016
chr4 1649688 0.87% 2599
chr5 2060661 1.14% 3169
chr6 1246437 0.73% 2009
chr7 1930694 1.21% 2842
chr8 1632198 1.12% 2432
chr9 840370 0.61% 1253
chr10 1185583 0.89% 1623
chr11 1037523 0.77% 1574
chr12 1292026 0.97% 1801
chr13 1114273 0.97% 1897
chr14 930627 0.87% 1561
chr15 928015 0.91% 1337
chr16 1032983 1.14% 1509
chr17 356090 0.43% 516
chr18 760269 0.95% 1269
chr19 3484594 5.94% 3619
chr20 410521 0.64% 623
chr21 901606 1.93% 1339
chr22 163869 0.32% 245
chrX 193880 0.12% 303
chrY 162298 0.28% 180
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40071 210 46652 683.96 554
global segment-length histogram

Files

Filename Size md5
ENCFF599AEL.bed.gz 767.29 KB 4b94aa6a19e4c2f0553002741db29868
ENCFF599AEL.tabix.bed.gz 394.09 KB b8ec7f53d23c9b708f636ac2e81f28ba
ENCFF599AEL.tabix.bed.gz.tbi 183.49 KB a4a4389a293fccd7652e9f730bd00444
genomic_resource.yaml 2.0 KB 3524631e5995958e61f0cb5efb914a9b
statistics/