Resource

Id Histone_ChIP-seq/ENCSR746MTUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR746MTU [biosample_summary="Homo sapiens trophoblast tissue female embryo (20 weeks)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR746MTU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000088/
  • biosample_summary: Homo sapiens trophoblast tissue female embryo (20 weeks)
  • date_created: 2017-03-22T16:17:03.382318+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR746MTU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (20 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR746MTU float

Histone_ChIP-seq_ENCSR746MTU
Histone_ChIP-seq ENCSR746MTU [biosample_summary="Homo sapiens trophoblast tissue female embryo (20 weeks)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR746MTU [1.46, 29.8]
n
87,404,136
mean
6.09
sd
3.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 874041362.72% 91419
chr1 8493349 3.41% 8869
chr2 5988036 2.47% 7186
chr3 5156696 2.60% 5912
chr4 2929743 1.54% 3658
chr5 4061845 2.24% 4741
chr6 3684151 2.16% 4247
chr7 4426354 2.78% 4708
chr8 2802088 1.93% 3371
chr9 4020824 2.91% 4101
chr10 4011683 3.00% 4398
chr11 4297195 3.18% 4260
chr12 5081211 3.81% 5027
chr13 1542472 1.35% 2012
chr14 2968595 2.77% 3399
chr15 3261003 3.20% 3710
chr16 4329543 4.79% 3747
chr17 5451148 6.55% 4746
chr18 1225746 1.53% 1602
chr19 5824172 9.94% 4374
chr20 2949596 4.58% 2721
chr21 1054569 2.26% 1085
chr22 2550749 5.02% 1995
chrX 1293368 0.83% 1550
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 91419 265 20246 956.08 677
global segment-length histogram

Files

Filename Size md5
ENCFF232XBN.bed.gz 2.05 MB a682bd1eb21493c122fc5e0c048237e9
ENCFF232XBN.tabix.bed.gz 946.17 KB 3bde644fab768a12b228d7f71b8a02d8
ENCFF232XBN.tabix.bed.gz.tbi 172.78 KB ff71f3a08f45ebb431b15572c58f62d2
genomic_resource.yaml 2.02 KB f6293772235f245cd7dc9945a47d9df4
statistics/