type: position_score
table:
  filename: ENCFF488FFQ.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR746CUY
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR746CUY [TISSUE: Homo sapiens mesenchymal stem cell originated
    from H1, TARGET: H3K9me3]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: male embryo


    **output\_type**: replicated peaks


    **audit\_internal\_action**: Archived analysis {ENCAN522OBS|/analyses/ENCAN522OBS/}
    has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}


    **audit\_warning**: Processed unfiltered alignments file {ENCFF960BQY|/files/ENCFF960BQY/}
    processed by ChIP-seq ENCODE3 hg19 pipeline has 44493332 mapped reads. The minimum
    ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human
    and investigated as a broad histone mark is 35 million mapped reads. The recommended
    value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data
    standards|/data-standards/chip-seq/})


    **audit\_warning**: Processed unfiltered alignments file {ENCFF455NFD|/files/ENCFF455NFD/}
    processed by ChIP-seq ENCODE3 hg19 pipeline has 43721888 mapped reads. The minimum
    ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human
    and investigated as a broad histone mark is 35 million mapped reads. The recommended
    value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data
    standards|/data-standards/chip-seq/})'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR746CUY
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: male embryo
    biosample_summary: Homo sapiens mesenchymal stem cell originated from H1
    replication_type: isogenic
    biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000134/
    perturbed: false
    doi: 10.17989/ENCSR746CUY
    date_created: '2015-09-16T19:15:23.476233+00:00'
    date_released: '2013-07-31'
    submitter_comment: ''
    target: H3K9me3