Resource

Id Histone_ChIP-seq/ENCSR741GJTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR741GJT [biosample_summary="Homo sapiens ACC112" and target="H3K79me2"]
Description
Labels
  • accession: ENCSR741GJT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007070/
  • biosample_summary: Homo sapiens ACC112
  • date_created: 2014-02-20T05:13:59.287025+00:00
  • date_released: 2016-10-28
  • doi: 10.17989/ENCSR741GJT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment: This experiment is unreplicated due to limited biosamples.
  • target: H3K79me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR741GJT float

Histone_ChIP-seq_ENCSR741GJT

Histone_ChIP-seq ENCSR741GJT [biosample_summary="Homo sapiens ACC112" and target="H3K79me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR741GJT [1.87, 25.9]
n
108,070,467
mean
7.97
sd
3.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1080704673.36% 109782
chr1 10505965 4.22% 10407
chr2 9176896 3.79% 8824
chr3 7797152 3.93% 7717
chr4 5053823 2.66% 5388
chr5 6098674 3.36% 5973
chr6 5592970 3.27% 5746
chr7 5633130 3.54% 5930
chr8 4483677 3.09% 4329
chr9 4785377 3.46% 4867
chr10 5188416 3.88% 5352
chr11 5780140 4.28% 5616
chr12 5639901 4.23% 5544
chr13 2680479 2.34% 2844
chr14 3626939 3.39% 3735
chr15 4206910 4.12% 4275
chr16 3816645 4.22% 3755
chr17 5222638 6.27% 5338
chr18 2085728 2.60% 2200
chr19 3162604 5.40% 3655
chr20 2588700 4.02% 2362
chr21 1035553 2.22% 1020
chr22 1543329 3.04% 1924
chrX 2225324 1.43% 2802
chrY 139497 0.24% 179
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 109782 170 23411 984.41 601
global segment-length histogram

Files

Filename Size md5
ENCFF097EHD.bed.gz 2.52 MB c4568435229ba8df45747e6d74fb5a9b
ENCFF097EHD.tabix.bed.gz 1.12 MB 4d97776c37f9ad806ed8a0756439ccb9
ENCFF097EHD.tabix.bed.gz.tbi 142.0 KB 32de29e9966d840dd015aba813239cb3
genomic_resource.yaml 2.16 KB 29fb7afac655740c02f8883a2f6095a3
statistics/