Resource

Id Histone_ChIP-seq/ENCSR740HSUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR740HSU [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR740HSU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue male adult (60 years)
  • date_created: 2020-05-01T02:35:24.657586+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR740HSU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR740HSU float

Histone_ChIP-seq_ENCSR740HSU
Histone_ChIP-seq ENCSR740HSU [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR740HSU [1.58, 10.3]
n
126,608,074
mean
4.11
sd
1.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1266080743.94% 131649
chr1 12604115 5.06% 12704
chr2 10312678 4.26% 10786
chr3 8588380 4.33% 9016
chr4 4862482 2.56% 5551
chr5 6473113 3.57% 6865
chr6 7254927 4.25% 7786
chr7 5914773 3.71% 6462
chr8 5211524 3.59% 5617
chr9 5623173 4.06% 5784
chr10 6581382 4.92% 6751
chr11 6823627 5.05% 6820
chr12 6397524 4.80% 6577
chr13 2871950 2.51% 3198
chr14 4207302 3.93% 4290
chr15 4679262 4.59% 4745
chr16 4663313 5.16% 4661
chr17 6921363 8.31% 6628
chr18 2283924 2.84% 2613
chr19 4704266 8.03% 4686
chr20 3656762 5.67% 3626
chr21 1391465 2.98% 1539
chr22 3071761 6.04% 3004
chrX 1471733 0.94% 1883
chrY 37275 0.07% 57
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 131649 205 30309 961.71 703
global segment-length histogram

Files

Filename Size md5
ENCFF239QVJ.bed.gz 2.81 MB cd62669f8aa3905d53b19af3d718138e
ENCFF239QVJ.tabix.bed.gz 1.33 MB cdca64a1676e6a5fa629218cea7eef3e
ENCFF239QVJ.tabix.bed.gz.tbi 324.52 KB a5f1c0ecfc4bdeaf643b6aea1a5504f3
genomic_resource.yaml 1.75 KB 3626694d9b8aab5b4ae4f6703936eae5
statistics/