Resource

Id Histone_ChIP-seq/ENCSR738BJJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR738BJJ [biosample_summary="Homo sapiens H9" and target="H2BK12ac"]
Description
Labels
  • accession: ENCSR738BJJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003045/
  • biosample_summary: Homo sapiens H9
  • date_created: 2015-10-01T07:16:27.793789+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR738BJJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2BK12ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR738BJJ float

Histone_ChIP-seq_ENCSR738BJJ

Histone_ChIP-seq ENCSR738BJJ [biosample_summary="Homo sapiens H9" and target="H2BK12ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR738BJJ [1.83, 10.7]
n
2,749,826
mean
3.75
sd
0.893

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 27498260.09% 12372
chr1 276890 0.11% 1203
chr1_KI270712v1_random 157 0.09% 1
chr2 188335 0.08% 863
chr3 176501 0.09% 814
chr4 121608 0.06% 587
chr5 154076 0.08% 702
chr6 178349 0.10% 798
chr7 145275 0.09% 664
chr8 111611 0.08% 521
chr9 101250 0.07% 455
chr10 136910 0.10% 618
chr11 126233 0.09% 571
chr12 131177 0.10% 591
chr13 60637 0.05% 294
chr14 101027 0.09% 452
chr15 88157 0.09% 386
chr16 87820 0.10% 403
chr17 114555 0.14% 506
chr18 66947 0.08% 304
chr19 109655 0.19% 467
chr20 71799 0.11% 317
chr21 26608 0.06% 123
chr22 76282 0.15% 298
chr22_KI270733v1_random 511 0.28% 2
chrX 97456 0.06% 432
3341 contigs with no values (185948685 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 12372 140 1604 222.26 189
global segment-length histogram

Files

Filename Size md5
ENCFF351CAW.bed.gz 247.61 KB bef906bcdd753dee11fe7cd4ed59bc8f
ENCFF351CAW.tabix.bed.gz 126.68 KB 9b819e4b4d4bedef78795c21970bc5b3
ENCFF351CAW.tabix.bed.gz.tbi 85.21 KB d14bf36ce623db9331ea6bd79a386b4a
genomic_resource.yaml 1.85 KB 71d02c4eb95d9588a29229d3e8aa781b
statistics/