Resource

Id Histone_ChIP-seq/ENCSR736PKVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR736PKV [biosample_summary="Homo sapiens ascending aorta tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR736PKV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001496/
  • biosample_summary: Homo sapiens ascending aorta tissue female adult (51 years)
  • date_created: 2016-10-22T16:08:34.026166+00:00
  • date_released: 2016-11-07
  • doi: 10.17989/ENCSR736PKV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR736PKV float

Histone_ChIP-seq_ENCSR736PKV
Histone_ChIP-seq ENCSR736PKV [biosample_summary="Homo sapiens ascending aorta tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR736PKV [1.3, 11.2]
n
69,962,792
mean
4.41
sd
1.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 699627922.17% 73568
chr1 7120571 2.86% 7331
chr1_KI270711v1_random 1042 2.47% 1
chr2 4990604 2.06% 5761
chr3 4077249 2.06% 4623
chr4 2428058 1.28% 2999
chr5 3087606 1.70% 3494
chr6 2722536 1.59% 3199
chr7 3037039 1.91% 3265
chr8 2072083 1.43% 2449
chr9 3123217 2.26% 3248
chr10 2992456 2.24% 3367
chr11 3932367 2.91% 3905
chr12 4134571 3.10% 4064
chr13 1209374 1.06% 1500
chr14 2418250 2.26% 2630
chr15 2690682 2.64% 2985
chr16 3495091 3.87% 3285
chr17 4365818 5.24% 4121
chr18 927833 1.15% 1198
chr19 5472691 9.34% 4358
chr20 2221660 3.45% 2273
chr21 825126 1.77% 872
chr22 2005759 3.95% 1853
chrUn_GL000219v1 1362 0.76% 3
chrUn_KI270438v1 334 0.30% 1
chrUn_KI270467v1 1072 27.35% 2
chrX 608341 0.39% 781
3339 contigs with no values (185966667 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73568 190 30514 950.99 694
global segment-length histogram

Files

Filename Size md5
ENCFF984LNL.bed.gz 1.49 MB 1cd72c3961f193afd83116eafa517f6a
ENCFF984LNL.tabix.bed.gz 750.26 KB 973ac7d8ec76f7b0ea50701cd0974f7c
ENCFF984LNL.tabix.bed.gz.tbi 143.49 KB 1da3d9146abff1a1e669bbbc30e7c8d8
genomic_resource.yaml 2.0 KB 549eb4675589da07e328447a92d4cad1
statistics/