Resource

Id Histone_ChIP-seq/ENCSR726ZZXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR726ZZX [biosample_summary="Homo sapiens ACC112" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR726ZZX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007070/
  • biosample_summary: Homo sapiens ACC112
  • date_created: 2014-02-20T05:42:43.973994+00:00
  • date_released: 2016-10-28
  • doi: 10.17989/ENCSR726ZZX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment: This experiment is unreplicated due to limited biosamples.
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR726ZZX float

Histone_ChIP-seq_ENCSR726ZZX

Histone_ChIP-seq ENCSR726ZZX [biosample_summary="Homo sapiens ACC112" and target="H3K4me1"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR726ZZX [1.64, 22]
n
133,804,215
mean
6.01
sd
2.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1338042154.16% 143302
chr1 12718963 5.11% 13372
chr2 12345647 5.10% 12557
chr3 10503832 5.30% 10942
chr4 7280094 3.83% 7964
chr5 8447980 4.65% 8820
chr6 8360371 4.89% 9023
chr7 6571119 4.12% 7120
chr8 6815321 4.70% 7250
chr9 6087054 4.40% 6275
chr10 6430402 4.81% 6874
chr11 6998759 5.18% 7127
chr12 6898053 5.18% 7354
chr13 3210306 2.81% 3768
chr14 4461895 4.17% 4613
chr15 4759244 4.67% 4833
chr16 3291526 3.64% 3757
chr17 4999107 6.00% 5411
chr18 3050298 3.80% 3328
chr19 1581843 2.70% 2272
chr20 2903737 4.51% 3184
chr21 1460757 3.13% 1582
chr22 1425628 2.81% 1804
chrUn_GL000195v1 1661 0.91% 2
chrX 3113616 2.00% 3934
chrY 87002 0.15% 136
3341 contigs with no values (128894189 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 143302 205 14342 933.72 741
global segment-length histogram

Files

Filename Size md5
ENCFF560UTN.bed.gz 3.29 MB 8528fa786c148a7be9bccef82ef9ecc6
ENCFF560UTN.tabix.bed.gz 1.47 MB 6607664507ba6e15f43cfa31754d85e2
ENCFF560UTN.tabix.bed.gz.tbi 365.21 KB 633e52450364f9ce0423cd593ce2de6a
genomic_resource.yaml 1.93 KB a220197708efdb610da3c00c785681bf
statistics/