Resource

Id Histone_ChIP-seq/ENCSR726EEMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR726EEM [biosample_summary="Homo sapiens tibial nerve tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR726EEM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue male adult (54 years)
  • date_created: 2017-12-06T21:10:53.207840+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR726EEM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR726EEM float

Histone_ChIP-seq_ENCSR726EEM
Histone_ChIP-seq ENCSR726EEM [biosample_summary="Homo sapiens tibial nerve tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR726EEM [1.35, 5.34]
n
2,970,398
mean
2.9
sd
0.559

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 29703980.09% 2383
chr1 121869 0.05% 114
chr1_KI270709v1_random 1727 2.58% 1
chr2 85251 0.04% 91
chr3 90445 0.05% 96
chr4 150121 0.08% 122
chr4_GL000008v2_random 3653 1.74% 2
chr5 195324 0.11% 161
chr5_GL000208v1_random 517 0.56% 1
chr6 64595 0.04% 71
chr7 152100 0.10% 141
chr8 84901 0.06% 87
chr9 89003 0.06% 70
chr10 105264 0.08% 100
chr11 95697 0.07% 99
chr12 171030 0.13% 129
chr13 34976 0.03% 41
chr14 35653 0.03% 40
chr14_GL000225v1_random 882 0.42% 1
chr14_KI270722v1_random 1553 0.80% 1
chr15 70471 0.07% 57
chr16 106507 0.12% 83
chr17 44654 0.05% 33
chr17_KI270729v1_random 9042 3.22% 7
chr18 27913 0.03% 27
chr19 1068056 1.82% 671
chr20 28358 0.04% 29
chr21 68034 0.15% 51
chr22 6620 0.01% 9
chr22_KI270732v1_random 600 1.44% 1
chr22_KI270735v1_random 620 1.45% 1
chr22_KI270736v1_random 6965 3.83% 4
chrUn_GL000216v2 10573 5.99% 10
chrUn_KI270337v1 667 59.50% 1
chrUn_KI270438v1 3724 3.31% 3
chrUn_KI270442v1 10382 2.65% 9
chrUn_KI270467v1 1761 44.92% 1
chrUn_KI270515v1 516 8.11% 1
chrUn_KI270519v1 703 0.51% 1
chrUn_KI270591v1 1513 26.10% 1
chrUn_KI270750v1 1139 0.77% 1
chrUn_KI270757v1 2297 3.22% 2
chrX 7436 <0.01% 7
chrY 7286 0.01% 5
3323 contigs with no values (126698892 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2383 370 8885 1246.5 975
global segment-length histogram

Files

Filename Size md5
ENCFF587VNZ.bed.gz 53.18 KB e4b4d88a5516cff9b183a47299a48209
ENCFF587VNZ.tabix.bed.gz 26.69 KB 75a7cd3aaf98425d9df7d29d94bb786c
ENCFF587VNZ.tabix.bed.gz.tbi 20.76 KB 3e65efc2af579633a578d31235fd9a3d
genomic_resource.yaml 1.5 KB b5ebb16d6932329f37a3084bc7c33bb4
statistics/