Resource

Id Histone_ChIP-seq/ENCSR723IKMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR723IKM [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR723IKM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001496/
  • biosample_summary: Homo sapiens ascending aorta tissue female adult (53 years)
  • date_created: 2016-10-22T16:07:02.814056+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR723IKM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR723IKM float

Histone_ChIP-seq_ENCSR723IKM
Histone_ChIP-seq ENCSR723IKM [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR723IKM [1.69, 14.5]
n
39,564,216
mean
4.63
sd
1.97

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 395642161.23% 41380
chr1 2411885 0.97% 2793
chr2 2646853 1.09% 3092
chr3 2457638 1.24% 2865
chr4 2320265 1.22% 2626
chr5 2762677 1.52% 2825
chr6 1946136 1.14% 2419
chr7 1911285 1.20% 2218
chr8 1664351 1.15% 2053
chr9 1567648 1.13% 1563
chr10 1622610 1.21% 1818
chr11 1545830 1.14% 1822
chr12 1977127 1.48% 2031
chr13 964931 0.84% 1212
chr14 945186 0.88% 1172
chr15 1092596 1.07% 1132
chr16 916788 1.01% 953
chr17 592380 0.71% 649
chr18 707444 0.88% 864
chr19 5777988 9.86% 2626
chr20 506816 0.79% 657
chr21 402273 0.86% 467
chr22 401251 0.79% 448
chrX 2422258 1.55% 3075
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41380 220 61254 956.12 654
global segment-length histogram

Files

Filename Size md5
ENCFF548FPQ.bed.gz 781.92 KB 0db523c4ecd502d8cd3b4059f21f0293
ENCFF548FPQ.tabix.bed.gz 408.94 KB fa8b445d2e174994663d11e3c6950df8
ENCFF548FPQ.tabix.bed.gz.tbi 200.13 KB d40ebea393d8fa55a94c9e51bc5de253
genomic_resource.yaml 1.73 KB a524d3ab541418fe44d5f796271e40ac
statistics/