Resource

Id Histone_ChIP-seq/ENCSR719COFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR719COF [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR719COF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001150/
  • biosample_summary: Homo sapiens body of pancreas tissue female adult (53 years)
  • date_created: 2016-10-22T16:10:58.014145+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR719COF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR719COF float

Histone_ChIP-seq_ENCSR719COF
Histone_ChIP-seq ENCSR719COF [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR719COF [1.89, 4.66]
n
323,769
mean
3.07
sd
0.408

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3237690.01% 924
chr1 28064 0.01% 79
chr2 31303 0.01% 88
chr3 28851 0.01% 84
chr4 23396 0.01% 64
chr5 21818 0.01% 60
chr6 20009 0.01% 53
chr7 18437 0.01% 52
chr8 19112 0.01% 55
chr9 9503 0.01% 27
chr10 16300 0.01% 48
chr11 12500 0.01% 36
chr12 14312 0.01% 43
chr13 12782 0.01% 38
chr14 7551 0.01% 23
chr15 11280 0.01% 33
chr16 6196 0.01% 19
chr17 4500 0.01% 13
chr18 5790 0.01% 17
chr19 9869 0.02% 26
chr20 5366 0.01% 16
chr21 3437 0.01% 12
chr22 2088 <0.01% 6
chrX 11305 0.01% 32
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 924 205 1099 350.4 321
global segment-length histogram

Files

Filename Size md5
ENCFF333RAD.bed.gz 17.2 KB 86372f3eeeb34bb5fcec119c51ce917c
ENCFF333RAD.tabix.bed.gz 9.47 KB 688f9d8fd508cd0019d5cf9fa69d3980
ENCFF333RAD.tabix.bed.gz.tbi 14.72 KB 472cf1de66d980c9fa48fe519d06e4bf
genomic_resource.yaml 1.74 KB fc7212528b8911a1eda2e7cbfffda7df
statistics/