Resource

Id Histone_ChIP-seq/ENCSR718LSMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR718LSM [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR718LSM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (54 years)
  • date_created: 2017-12-06T21:03:06.032093+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR718LSM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR718LSM float

Histone_ChIP-seq_ENCSR718LSM
Histone_ChIP-seq ENCSR718LSM [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR718LSM [1.76, 3.88]
n
432,202
mean
2.59
sd
0.335

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 4322020.01% 943
chr1 39780 0.02% 89
chr2 26692 0.01% 60
chr3 22658 0.01% 51
chr4 8037 <0.01% 19
chr5 18757 0.01% 42
chr6 17989 0.01% 42
chr7 15862 0.01% 35
chr8 9918 0.01% 25
chr9 21378 0.02% 49
chr10 12005 0.01% 30
chr11 20097 0.01% 44
chr12 29061 0.02% 63
chr13 7651 0.01% 19
chr14 15214 0.01% 33
chr15 17229 0.02% 41
chr16 23694 0.03% 48
chr17 32166 0.04% 62
chr18 7279 0.01% 19
chr19 64835 0.11% 121
chr20 7773 0.01% 19
chr21 2762 0.01% 6
chr22 11365 0.02% 26
3344 contigs with no values (342345395 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 943 235 1422 458.33 410
global segment-length histogram

Files

Filename Size md5
ENCFF159MZF.bed.gz 19.37 KB d04bc6a5a729d7f6c77fd9dc5902c621
ENCFF159MZF.tabix.bed.gz 10.34 KB 1b625a8a82a19a648ec6cd1a2366a707
ENCFF159MZF.tabix.bed.gz.tbi 13.8 KB 2095c1ca85f0e869ca1f797243028bf3
genomic_resource.yaml 1.51 KB e0d38f9fec09e17d1cb51666f181c9ef
statistics/