Resource

Id Histone_ChIP-seq/ENCSR717HIAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR717HIA [biosample_summary="Homo sapiens placenta tissue male embryo (16 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR717HIA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue male embryo (16 weeks)
  • date_created: 2017-03-22T16:16:55.363739+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR717HIA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR717HIA float

Histone_ChIP-seq_ENCSR717HIA
Histone_ChIP-seq ENCSR717HIA [biosample_summary="Homo sapiens placenta tissue male embryo (16 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR717HIA [1.42, 48.8]
n
90,544,018
mean
7.9
sd
5.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 905440182.81% 99614
chr1 9384032 3.77% 10223
chr2 6684201 2.76% 7642
chr3 5311477 2.68% 5990
chr4 2861951 1.50% 3453
chr5 4066900 2.24% 4726
chr6 4964883 2.91% 5816
chr7 4328605 2.72% 4984
chr8 3519248 2.42% 4074
chr9 4197099 3.03% 4657
chr10 4266946 3.19% 4694
chr11 5294481 3.92% 5391
chr12 4353077 3.27% 4827
chr13 1635165 1.43% 2024
chr14 3446611 3.22% 3588
chr15 3169893 3.11% 3481
chr16 3570677 3.95% 3735
chr17 5065167 6.08% 5118
chr18 1392940 1.73% 1693
chr19 4950932 8.45% 4748
chr20 2833000 4.40% 2994
chr21 1211538 2.59% 1410
chr22 2574441 5.07% 2509
chrX 1433459 0.92% 1791
chrY 27295 0.05% 46
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99614 170 23606 908.95 620
global segment-length histogram

Files

Filename Size md5
ENCFF435LTO.bed.gz 2.17 MB 6e8d30d878e7180b86caebc1e86b3d5e
ENCFF435LTO.tabix.bed.gz 1.01 MB abc44664ced26ff8958799c7a4e2245a
ENCFF435LTO.tabix.bed.gz.tbi 241.65 KB f7360261fcca2db91dd0084fd9b1738b
genomic_resource.yaml 1.5 KB f7f03976154bc39b59d70b287990347c
statistics/