Resource

Id Histone_ChIP-seq/ENCSR716FUHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR716FUH [biosample_summary="Homo sapiens thyroid gland tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR716FUH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue female adult (53 years)
  • date_created: 2016-10-19T23:07:58.912413+00:00
  • date_released: 2016-11-05
  • doi: 10.17989/ENCSR716FUH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR716FUH float

Histone_ChIP-seq_ENCSR716FUH
Histone_ChIP-seq ENCSR716FUH [biosample_summary="Homo sapiens thyroid gland tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR716FUH [1.61, 54.9]
n
100,801,100
mean
11.5
sd
7.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1008011003.13% 68529
chr1 9779982 3.93% 6515
chr1_KI270713v1_random 772 1.89% 1
chr2 7576195 3.13% 5190
chr3 6368045 3.21% 4277
chr4 3995745 2.10% 2799
chr5 4624925 2.55% 3265
chr6 5775276 3.38% 3859
chr7 4110184 2.58% 2954
chr8 4344224 2.99% 2983
chr9 4845033 3.50% 3386
chr10 5279517 3.95% 3480
chr11 5787265 4.28% 3718
chr12 5056937 3.79% 3204
chr13 2176844 1.90% 1578
chr14 3711420 3.47% 2390
chr15 3626120 3.56% 2440
chr16 3826341 4.24% 2691
chr17 5480969 6.58% 3565
chr18 2030031 2.53% 1455
chr19 3810105 6.50% 2705
chr20 3164817 4.91% 2092
chr21 1098082 2.35% 768
chr22 2666458 5.25% 1763
chrUn_GL000219v1 1311 0.73% 1
chrX 1664502 1.07% 1450
3341 contigs with no values (186084557 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68529 225 42941 1470.93 995
global segment-length histogram

Files

Filename Size md5
ENCFF422YOG.bed.gz 1.6 MB 52c939520a57fb8aeb0f65a3096a83b4
ENCFF422YOG.tabix.bed.gz 742.79 KB 709cb8a60f6caa95cedc72baf4ce6b3f
ENCFF422YOG.tabix.bed.gz.tbi 226.3 KB 56c712ab8043b246795173fe51b7030f
genomic_resource.yaml 1.51 KB 58d9f80ab966aefd130cb925a33ef872
statistics/