Resource

Id Histone_ChIP-seq/ENCSR713HJScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR713HJS [biosample_summary="Homo sapiens layer of hippocampus tissue male adult (81 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR713HJS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002305/
  • biosample_summary: Homo sapiens layer of hippocampus tissue male adult (81 years)
  • date_created: 2015-09-15T19:49:16.709908+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR713HJS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR713HJS float

Histone_ChIP-seq_ENCSR713HJS
Histone_ChIP-seq ENCSR713HJS [biosample_summary="Homo sapiens layer of hippocampus tissue male adult (81 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR713HJS [1.9, 23.9]
n
10,232,961
mean
5
sd
1.51

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 102329610.32% 25984
chr1 899459 0.36% 2365
chr2 755838 0.31% 1823
chr3 294767 0.15% 826
chr4 396416 0.21% 940
chr5 510359 0.28% 1244
chr6 534292 0.31% 1377
chr7 610667 0.38% 1440
chr8 468953 0.32% 1261
chr9 454655 0.33% 1057
chr10 598927 0.45% 1524
chr11 509164 0.38% 1413
chr12 533005 0.40% 1321
chr13 189543 0.17% 489
chr14 342414 0.32% 859
chr15 294748 0.29% 770
chr16 430288 0.48% 1132
chr17 802158 0.96% 1890
chr18 154863 0.19% 403
chr19 568066 0.97% 1419
chr20 477081 0.74% 1277
chr21 109148 0.23% 307
chr22 257096 0.51% 724
chrX 39537 0.03% 116
chrY 1517 <0.01% 7
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25984 160 7135 393.82 278
global segment-length histogram

Files

Filename Size md5
ENCFF621YPU.bed.gz 435.51 KB 9571c87ff37a4ef81b7a6843d2776937
ENCFF621YPU.tabix.bed.gz 240.11 KB fbe176f32bb3bd1044f8de7583748add
ENCFF621YPU.tabix.bed.gz.tbi 96.72 KB 34e044fc5d93fd0bec13877bdfd0cfef
genomic_resource.yaml 2.02 KB 039534e41f1d799092b6f4453f0fb11a
statistics/