Resource

Id Histone_ChIP-seq/ENCSR707AEWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR707AEW [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR707AEW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001496/
  • biosample_summary: Homo sapiens ascending aorta tissue female adult (53 years)
  • date_created: 2016-10-22T16:11:17.019651+00:00
  • date_released: 2017-03-22
  • doi: 10.17989/ENCSR707AEW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR707AEW float

Histone_ChIP-seq_ENCSR707AEW
Histone_ChIP-seq ENCSR707AEW [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR707AEW [1.61, 9.94]
n
74,699,824
mean
3.61
sd
0.968

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 746998242.32% 96811
chr1 7667272 3.08% 9319
chr2 6275637 2.59% 8296
chr3 5665037 2.86% 7427
chr4 2996858 1.58% 4324
chr5 4001543 2.20% 5392
chr6 4092386 2.40% 5761
chr7 3145712 1.97% 4202
chr8 2907076 2.00% 3959
chr9 3455971 2.50% 4320
chr10 4679391 3.50% 5988
chr11 4213934 3.12% 5149
chr12 3849877 2.89% 5097
chr13 1552725 1.36% 2209
chr14 2376419 2.22% 2985
chr15 2902391 2.85% 3631
chr16 2488816 2.75% 3140
chr17 3559495 4.28% 4315
chr18 1290503 1.61% 1837
chr19 2453576 4.19% 2951
chr20 2085188 3.24% 2545
chr21 903943 1.94% 1189
chr22 1669076 3.28% 1928
chrX 466998 0.30% 847
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 96811 215 17770 771.6 594
global segment-length histogram

Files

Filename Size md5
ENCFF083WSW.bed.gz 2.05 MB 455099ad64c19294590f5dfd1a71ed9c
ENCFF083WSW.tabix.bed.gz 1011.0 KB 6337d9444315cd18e8163718779c60e8
ENCFF083WSW.tabix.bed.gz.tbi 259.5 KB a5aa80a2b1a3c081e6227218759e2823
genomic_resource.yaml 1.52 KB 0b299209c8d3c986563a55cd341c23cb
statistics/