Resource

Id Histone_ChIP-seq/ENCSR706VZIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR706VZI [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR706VZI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:33.884578+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR706VZI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR706VZI float

Histone_ChIP-seq_ENCSR706VZI
Histone_ChIP-seq ENCSR706VZI [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR706VZI [1.65, 90.6]
n
60,361,548
mean
36
sd
24.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 603615481.88% 34780
chr1 5790734 2.33% 3335
chr2 3880120 1.60% 2308
chr3 3108752 1.57% 1726
chr4 2169776 1.14% 1217
chr5 2795576 1.54% 1587
chr6 3138922 1.84% 1703
chr7 2878429 1.81% 1725
chr8 2440360 1.68% 1530
chr9 2401490 1.74% 1387
chr10 2624363 1.96% 1561
chr11 3152257 2.33% 1726
chr12 3258964 2.45% 1794
chr13 1149805 1.01% 689
chr14 1892638 1.77% 1052
chr15 1956359 1.92% 1165
chr16 2611386 2.89% 1508
chr17 3756674 4.51% 2071
chr18 925225 1.15% 560
chr19 5054453 8.62% 3037
chr20 1697924 2.63% 996
chr21 631095 1.35% 401
chr22 1397132 2.75% 804
chrX 1649114 1.06% 898
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34780 235 22842 1735.52 1192
global segment-length histogram

Files

Filename Size md5
ENCFF931RBV.bed.gz 944.9 KB 71f54d0c19b89f0f82d6cae7bb0c1561
ENCFF931RBV.tabix.bed.gz 402.02 KB cf5bd4f5122c8531cd5620af1762f6da
ENCFF931RBV.tabix.bed.gz.tbi 177.31 KB 1a408df4b3e316ae1f35387b5911dbb4
genomic_resource.yaml 2.32 KB bcf19462d70957cbf2f2df40a9c24d68
statistics/