Resource

Id Histone_ChIP-seq/ENCSR706PAKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR706PAK [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR706PAK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)
  • date_created: 2021-04-30T04:18:01.720732+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR706PAK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (79 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR706PAK float

Histone_ChIP-seq_ENCSR706PAK
Histone_ChIP-seq ENCSR706PAK [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR706PAK [1.57, 10.8]
n
40,216,494
mean
4.22
sd
1.44

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 402164941.25% 49097
chr1 1340954 0.54% 1420
chr2 1361182 0.56% 1374
chr3 503335 0.25% 532
chr4 783895 0.41% 735
chr5 986262 0.54% 924
chr6 1374811 0.80% 1247
chr7 1020654 0.64% 840
chr8 715354 0.49% 753
chr9 601270 0.43% 601
chr10 1033620 0.77% 1061
chr11 606765 0.45% 659
chr12 884179 0.66% 905
chr13 448094 0.39% 458
chr14 959322 0.90% 1082
chr15 650137 0.64% 766
chr16 739164 0.82% 919
chr17 1106912 1.33% 1040
chr18 360058 0.45% 421
chr19 773845 1.32% 924
chr20 666414 1.03% 795
chr21 372385 0.80% 450
chr22 269818 0.53% 366
chrX 22657700 14.52% 30824
chrY 364 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49097 195 33177 819.12 602
global segment-length histogram

Files

Filename Size md5
ENCFF079QBO.bed.gz 878.78 KB d7cf2f1a69b719339e425a50eed54760
ENCFF079QBO.tabix.bed.gz 464.75 KB 079d42631b007259bf289a11b9980d9f
ENCFF079QBO.tabix.bed.gz.tbi 115.0 KB dfd8c9523ee6d535941ab4ac6b77fe1a
genomic_resource.yaml 2.05 KB 2de8066775944135b017f662933af7fa
statistics/