Resource

Id Histone_ChIP-seq/ENCSR706KWRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR706KWR [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR706KWR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue male adult (37 years)
  • date_created: 2019-08-14T04:36:05.241611+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR706KWR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR706KWR float

Histone_ChIP-seq_ENCSR706KWR
Histone_ChIP-seq ENCSR706KWR [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR706KWR [1.55, 22.9]
n
258,402,674
mean
6.47
sd
3.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2584026748.03% 154262
chr1 26401422 10.60% 14762
chr2 20669924 8.53% 12623
chr3 16893985 8.52% 10467
chr4 10527258 5.53% 7095
chr5 13070274 7.20% 8072
chr6 14705707 8.61% 9320
chr7 11728139 7.36% 7635
chr8 10846835 7.47% 6808
chr9 11761218 8.50% 6960
chr10 13053313 9.76% 7627
chr11 13817240 10.23% 7838
chr12 12754663 9.57% 7634
chr13 5699069 4.98% 3681
chr14 8925789 8.34% 4980
chr15 9145390 8.97% 5382
chr16 9645071 10.68% 5293
chr17 13436806 16.14% 7014
chr18 5046804 6.28% 3336
chr19 9188389 15.68% 4928
chr20 7808024 12.12% 4498
chr21 3226780 6.91% 1976
chr22 6285775 12.37% 3297
chrX 3606095 2.31% 2877
chrY 158704 0.28% 159
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 154262 245 58063 1675.09 1152
global segment-length histogram

Files

Filename Size md5
ENCFF977NUM.bed.gz 3.61 MB 7f81dee141df9321384c1de1c3fdc826
ENCFF977NUM.tabix.bed.gz 1.61 MB 6f0ae714355da74156cd890b15ddfb6b
ENCFF977NUM.tabix.bed.gz.tbi 330.6 KB f16fe7c6534c4a46d1d474469647c7bf
genomic_resource.yaml 1.77 KB 36aae38b1dd44373a3a4bae9dbae2536
statistics/