Resource

Id Histone_ChIP-seq/ENCSR699FHHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR699FHH [biosample_summary="Homo sapiens thyroid gland tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR699FHH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue male adult (54 years)
  • date_created: 2016-03-19T00:36:31.945605+00:00
  • date_released: 2016-05-23
  • doi: 10.17989/ENCSR699FHH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR699FHH float

Histone_ChIP-seq_ENCSR699FHH
Histone_ChIP-seq ENCSR699FHH [biosample_summary="Homo sapiens thyroid gland tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR699FHH [1.45, 4.68]
n
451,802
mean
2.98
sd
0.49

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 4518020.01% 1339
chr1 22534 0.01% 70
chr2 20799 0.01% 78
chr3 25899 0.01% 78
chr4 29249 0.02% 84
chr5 34272 0.02% 106
chr6 14622 0.01% 55
chr7 26748 0.02% 85
chr8 18985 0.01% 63
chr9 17745 0.01% 54
chr10 15612 0.01% 51
chr11 23371 0.02% 77
chr12 29205 0.02% 82
chr13 9677 0.01% 32
chr14 7464 0.01% 27
chr15 7755 0.01% 26
chr16 17813 0.02% 48
chr17 4721 0.01% 15
chr18 5499 0.01% 20
chr19 93830 0.16% 213
chr20 3635 0.01% 10
chr21 18223 0.04% 50
chr22 2148 <0.01% 7
chrX 744 <0.01% 3
chrY 1252 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1339 210 1835 337.42 282
global segment-length histogram

Files

Filename Size md5
ENCFF725PWV.bed.gz 25.25 KB 678ba556346f8e07f8bc2ef16a786f3e
ENCFF725PWV.tabix.bed.gz 13.95 KB ed4abe53415445739185ce1291505a47
ENCFF725PWV.tabix.bed.gz.tbi 16.11 KB 13481917609f6e3d11720ebb57d46074
genomic_resource.yaml 1.5 KB 74e261513f2dcfc44a85288a2f7937c7
statistics/