Resource

Id Histone_ChIP-seq/ENCSR697MUJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR697MUJ [biosample_summary="Homo sapiens skin epidermis tissue female adult (64 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR697MUJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001003/
  • biosample_summary: Homo sapiens skin epidermis tissue female adult (64 years)
  • date_created: 2020-07-02T16:53:32.897418+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR697MUJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (64 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR697MUJ float

Histone_ChIP-seq_ENCSR697MUJ
Histone_ChIP-seq ENCSR697MUJ [biosample_summary="Homo sapiens skin epidermis tissue female adult (64 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR697MUJ [1.69, 68.7]
n
80,753,980
mean
11.1
sd
9.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 807539802.51% 63394
chr1 8636700 3.47% 6581
chr2 6040923 2.49% 4920
chr3 4855654 2.45% 3902
chr4 2564802 1.35% 2231
chr5 3567518 1.97% 2987
chr6 4493174 2.63% 3575
chr7 3255977 2.04% 2737
chr8 2966933 2.04% 2495
chr9 3822037 2.76% 2934
chr10 3889579 2.91% 3064
chr11 4666669 3.45% 3409
chr12 4352966 3.27% 3299
chr13 1562133 1.37% 1311
chr14 3034871 2.84% 2233
chr15 2768508 2.71% 2201
chr16 3160679 3.50% 2524
chr17 4909414 5.90% 3599
chr18 1390590 1.73% 1178
chr19 4134982 7.05% 2905
chr20 2271723 3.53% 1766
chr21 984159 2.11% 848
chr22 2180476 4.29% 1619
chrX 1243513 0.80% 1076
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63394 230 32282 1273.84 862
global segment-length histogram

Files

Filename Size md5
ENCFF895PGR.bed.gz 1.42 MB 80b12dd7329767a3b2202b6463eab847
ENCFF895PGR.tabix.bed.gz 674.65 KB 4499fe7ea6658a35fcaa932c17dfb836
ENCFF895PGR.tabix.bed.gz.tbi 212.97 KB 116ffb29054d3294065e965aa6f8235f
genomic_resource.yaml 1.73 KB e72421dcfbea0ebcc475560269066244
statistics/