Resource

Id Histone_ChIP-seq/ENCSR693KAXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR693KAX [biosample_summary="Homo sapiens BLaER1" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR693KAX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1
  • date_created: 2022-01-27T21:50:17.575713+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR693KAX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR693KAX float

Histone_ChIP-seq_ENCSR693KAX
Histone_ChIP-seq ENCSR693KAX [biosample_summary="Homo sapiens BLaER1" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR693KAX [1.43, 31.9]
n
226,024,121
mean
9.91
sd
5.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2260241217.03% 165665
chr1 21036351 8.45% 15356
chr1_KI270706v1_random 263 0.15% 1
chr1_KI270712v1_random 2813 1.60% 3
chr1_KI270713v1_random 9974 24.48% 11
chr1_KI270714v1_random 1185 2.84% 2
chr2 17426137 7.20% 13255
chr3 12040651 6.07% 9625
chr3_GL000221v1_random 3842 2.47% 7
chr4 8291666 4.36% 6770
chr4_GL000008v2_random 325 0.15% 1
chr5 10944482 6.03% 8323
chr6 11230686 6.58% 8604
chr7 11203675 7.03% 8549
chr8 9950149 6.86% 7448
chr9 10060520 7.27% 7145
chr9_KI270717v1_random 514 1.28% 2
chr9_KI270719v1_random 689 0.39% 2
chr10 11668788 8.72% 8682
chr11 11174948 8.27% 7766
chr11_KI270721v1_random 1873 1.87% 5
chr12 10169468 7.63% 7407
chr13 5049170 4.41% 4274
chr14 7570868 7.07% 5274
chr14_GL000009v2_random 2320 1.15% 4
chr14_GL000194v1_random 2620 1.37% 4
chr14_GL000225v1_random 1462 0.69% 2
chr14_KI270723v1_random 807 2.12% 2
chr14_KI270724v1_random 315 0.80% 1
chr14_KI270726v1_random 3361 7.68% 3
chr15 7403068 7.26% 5553
chr15_KI270727v1_random 3868 0.86% 6
chr16 9973816 11.04% 6708
chr16_KI270728v1_random 2560 0.14% 3
chr17 13044024 15.67% 8280
chr17_GL000205v2_random 16181 8.72% 11
chr17_KI270729v1_random 776 0.28% 2
chr18 4523290 5.63% 3636
chr19 10079765 17.20% 6355
chr20 7697396 11.94% 5473
chr21 3459023 7.41% 2409
chr22 7035102 13.84% 4383
chr22_KI270731v1_random 2437 1.62% 5
chr22_KI270733v1_random 6522 3.63% 9
chr22_KI270734v1_random 1810 1.10% 4
chrUn_GL000195v1 4570 2.50% 7
chrUn_GL000214v1 2070 1.50% 4
chrUn_GL000216v2 2085 1.18% 3
chrUn_GL000218v1 250 0.16% 1
chrUn_GL000219v1 10012 5.59% 11
chrUn_GL000220v1 1578 0.98% 4
chrUn_GL000224v1 710 0.40% 1
chrUn_KI270438v1 266 0.24% 1
chrUn_KI270442v1 1770 0.45% 3
chrUn_KI270516v1 297 22.85% 1
chrUn_KI270519v1 1897 1.37% 4
chrUn_KI270742v1 278 0.15% 1
chrUn_KI270744v1 4111 2.44% 5
chrUn_KI270751v1 1899 1.26% 3
chrUn_KI270753v1 3020 4.80% 3
chrX 4883655 3.13% 4238
chrY 6093 0.01% 10
3305 contigs with no values (121560472 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 165665 250 53078 1364.34 796
global segment-length histogram

Files

Filename Size md5
ENCFF535CYR.bed.gz 3.68 MB cce13c49e42fe36e217331fa45390399
ENCFF535CYR.tabix.bed.gz 1.68 MB e430c8b62235b3af91dc1ac5af97d5d9
ENCFF535CYR.tabix.bed.gz.tbi 389.82 KB 87607e7e45cc83f22c5e90c3953903a2
genomic_resource.yaml 2.56 KB 7ea31d9fa3441f6704345a2f722a838e
statistics/