Resource

Id Histone_ChIP-seq/ENCSR693GVUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR693GVU [biosample_summary="Homo sapiens cingulate gyrus tissue female adult (75 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR693GVU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002967/
  • biosample_summary: Homo sapiens cingulate gyrus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:26.940963+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR693GVU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR693GVU float

Histone_ChIP-seq_ENCSR693GVU
Histone_ChIP-seq ENCSR693GVU [biosample_summary="Homo sapiens cingulate gyrus tissue female adult (75 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR693GVU [1.41, 57]
n
40,266,300
mean
15.3
sd
8.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 402663001.25% 40514
chr1 3930476 1.58% 3819
chr2 2783917 1.15% 2815
chr3 2364003 1.19% 2278
chr4 1626266 0.85% 1565
chr5 2026061 1.12% 1976
chr6 2341890 1.37% 2364
chr7 1879648 1.18% 1950
chr8 1576380 1.09% 1602
chr9 1660416 1.20% 1679
chr10 1782504 1.33% 1855
chr11 2272100 1.68% 2205
chr12 2114820 1.59% 2120
chr13 925863 0.81% 974
chr14 1332715 1.25% 1295
chr15 1253319 1.23% 1240
chr16 1529086 1.69% 1554
chr17 2191501 2.63% 2231
chr18 751332 0.93% 803
chr19 2493873 4.25% 2545
chr20 1046754 1.62% 1086
chr21 404709 0.87% 452
chr22 894833 1.76% 903
chrX 1083541 0.69% 1202
chrY 293 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40514 160 8934 993.89 726
global segment-length histogram

Files

Filename Size md5
ENCFF999UWI.bed.gz 915.78 KB 77b1e1c721b73260526a6f6465bd16ce
ENCFF999UWI.tabix.bed.gz 428.92 KB 9c2b93e162ee53f685c12c1b8d980f91
ENCFF999UWI.tabix.bed.gz.tbi 193.36 KB 5ce4441a6ab7b575636ba080dd959e2a
genomic_resource.yaml 1.52 KB 9f921c255e3467d3edf8200fc14eecd3
statistics/