Resource

Id Histone_ChIP-seq/ENCSR692WNLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR692WNL [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR692WNL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (61 years)
  • date_created: 2021-01-28T22:01:53.542288+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR692WNL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR692WNL float

Histone_ChIP-seq_ENCSR692WNL
Histone_ChIP-seq ENCSR692WNL [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR692WNL [1.52, 9.69]
n
72,542,476
mean
3.86
sd
1.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 725424762.25% 71154
chr1 7422371 2.98% 7157
chr2 5593637 2.31% 5525
chr3 4436714 2.24% 4531
chr4 2466753 1.30% 2597
chr5 3412767 1.88% 3406
chr6 4005880 2.35% 4080
chr7 3197762 2.01% 3273
chr8 2842969 1.96% 2901
chr9 3126731 2.26% 3067
chr10 3599912 2.69% 3461
chr11 4126342 3.05% 3866
chr12 3761858 2.82% 3616
chr13 1484657 1.30% 1542
chr14 2646053 2.47% 2556
chr15 2645925 2.59% 2519
chr16 2939876 3.25% 2761
chr17 4564037 5.48% 4278
chr18 1156471 1.44% 1217
chr19 3608206 6.16% 3350
chr20 2136984 3.32% 2017
chr21 786834 1.68% 818
chr22 1908424 3.76% 1805
chrX 671313 0.43% 811
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71154 230 25880 1019.51 756
global segment-length histogram

Files

Filename Size md5
ENCFF347CUW.bed.gz 1.35 MB 9b31ec7d4df205b3d5d7d98709593f08
ENCFF347CUW.tabix.bed.gz 713.0 KB f559869523f4fda35e696993d246705a
ENCFF347CUW.tabix.bed.gz.tbi 216.11 KB dcf31d9a45e97393f202f8d898d54cb5
genomic_resource.yaml 1.49 KB cee195f56ae8dee09283e813aa13680d
statistics/