Resource

Id Histone_ChIP-seq/ENCSR692HIOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR692HIO [biosample_summary="Homo sapiens NCI-H929" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR692HIO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001221/
  • biosample_summary: Homo sapiens NCI-H929
  • date_created: 2015-05-20T20:43:03.479514+00:00
  • date_released: 2016-10-19
  • doi: 10.17989/ENCSR692HIO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR692HIO float

Histone_ChIP-seq_ENCSR692HIO
Histone_ChIP-seq ENCSR692HIO [biosample_summary="Homo sapiens NCI-H929" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR692HIO [1.18, 20.7]
n
137,892,631
mean
6.68
sd
3.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1378926314.29% 116187
chr1 12829777 5.15% 10179
chr2 11311351 4.67% 9749
chr3 9959512 5.02% 8269
chr4 8208667 4.32% 7536
chr5 9444856 5.20% 7781
chr6 8972902 5.25% 7380
chr7 6776477 4.25% 6035
chr8 7448518 5.13% 6383
chr9 5285212 3.82% 4592
chr10 6040249 4.51% 5154
chr11 6789680 5.03% 5539
chr12 6343560 4.76% 5324
chr13 2083998 1.82% 2128
chr14 4576950 4.28% 3735
chr15 4506867 4.42% 3608
chr16 4240876 4.69% 3453
chr17 5206973 6.25% 4052
chr18 3319003 4.13% 3019
chr19 4065594 6.94% 3278
chr20 3038809 4.72% 2430
chr21 1583346 3.39% 1429
chr22 2208026 4.34% 1665
chrX 3649598 2.34% 3464
chrY 1830 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 116187 220 43883 1186.82 866
global segment-length histogram

Files

Filename Size md5
ENCFF763AYC.bed.gz 2.92 MB 9dc9da681a19f4c88ae5068d567f551e
ENCFF763AYC.tabix.bed.gz 1.25 MB 893c0e33aea6d4407738a0d87cce7e28
ENCFF763AYC.tabix.bed.gz.tbi 436.5 KB 84db314b8728c9b6386d8227089e3d3d
genomic_resource.yaml 1.37 KB ef09da7d0c4c13de7d3205e1a03155aa
statistics/