Resource

Id Histone_ChIP-seq/ENCSR681ELNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR681ELN [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR681ELN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:18:21.687195+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR681ELN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR681ELN float

Histone_ChIP-seq_ENCSR681ELN
Histone_ChIP-seq ENCSR681ELN [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR681ELN [1.85, 57.2]
n
125,896,345
mean
10.5
sd
7.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1258963453.91% 103243
chr1 12489914 5.02% 9958
chr2 9329671 3.85% 7914
chr3 7779166 3.92% 6463
chr4 5157005 2.71% 4372
chr5 6926999 3.82% 5847
chr6 6514508 3.81% 5403
chr7 5947987 3.73% 5242
chr8 5131517 3.54% 4417
chr9 6125112 4.43% 4803
chr10 6473369 4.84% 5176
chr11 7553995 5.59% 5879
chr12 6482172 4.86% 5417
chr13 2993491 2.62% 2550
chr14 4185085 3.91% 3305
chr15 4351226 4.27% 3497
chr16 4436014 4.91% 3681
chr17 6825527 8.20% 5188
chr18 2571179 3.20% 2202
chr19 4951246 8.45% 3889
chr20 3576345 5.55% 2913
chr21 1339529 2.87% 1121
chr22 2949484 5.80% 2321
chrX 1805804 1.16% 1685
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103243 175 50778 1219.42 737
global segment-length histogram

Files

Filename Size md5
ENCFF954CRD.bed.gz 2.16 MB 8bcdccb1d3931a43560d37b558cece0b
ENCFF954CRD.tabix.bed.gz 1.03 MB a62d3e295e66d810851fa262ddc4b633
ENCFF954CRD.tabix.bed.gz.tbi 280.74 KB 827041a35547fe4d9a235e16b9097ef0
genomic_resource.yaml 1.77 KB 50b1f0661de14c80b2fe9a5830ab4d44
statistics/