Resource

Id Histone_ChIP-seq/ENCSR677MOEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR677MOE [biosample_summary="Homo sapiens tibial nerve tissue female adult (51 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR677MOE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue female adult (51 years)
  • date_created: 2018-10-31T03:11:55.680021+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR677MOE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR677MOE float

Histone_ChIP-seq_ENCSR677MOE
Histone_ChIP-seq ENCSR677MOE [biosample_summary="Homo sapiens tibial nerve tissue female adult (51 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR677MOE [1.51, 51.8]
n
31,113,493
mean
19.1
sd
8.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 311134930.97% 19473
chr1 3099993 1.25% 1961
chr1_KI270712v1_random 946 0.54% 1
chr2 2115720 0.87% 1281
chr3 1785566 0.90% 1104
chr4 1261165 0.66% 756
chr5 1471168 0.81% 879
chr6 1790385 1.05% 1104
chr7 1514135 0.95% 963
chr8 1142046 0.79% 691
chr9 1275274 0.92% 816
chr10 1340729 1.00% 831
chr11 1708907 1.27% 1037
chr12 1672055 1.25% 998
chr13 650851 0.57% 397
chr14 1021564 0.95% 610
chr15 1015522 1.00% 634
chr16 1165305 1.29% 760
chr17 1837530 2.21% 1173
chr17_GL000205v2_random 1533 0.83% 2
chr18 535037 0.67% 331
chr19 1933253 3.30% 1321
chr20 773090 1.20% 492
chr21 310099 0.66% 193
chr22 707880 1.39% 453
chrUn_GL000219v1 1474 0.82% 1
chrUn_KI270467v1 1383 35.28% 2
chrX 980883 0.63% 682
3339 contigs with no values (185759748 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19473 234 17554 1597.78 1487
global segment-length histogram

Files

Filename Size md5
ENCFF295YLK.bed.gz 543.58 KB ecc45e7d8d18fee6336ab1d9c5798cc0
ENCFF295YLK.tabix.bed.gz 230.45 KB fdb9c9b117f22a1fca5ecd51c590ca6e
ENCFF295YLK.tabix.bed.gz.tbi 136.72 KB 06d4271a81b7f648aaa193f25650984b
genomic_resource.yaml 1.51 KB 50cff2fba37d2599bd678f0ca3323a85
statistics/