Resource

Id Histone_ChIP-seq/ENCSR677LBHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR677LBH [biosample_summary="Homo sapiens gastroesophageal sphincter tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR677LBH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue female adult (53 years)
  • date_created: 2016-10-19T23:04:28.881740+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR677LBH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR677LBH float

Histone_ChIP-seq_ENCSR677LBH
Histone_ChIP-seq ENCSR677LBH [biosample_summary="Homo sapiens gastroesophageal sphincter tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR677LBH [1.19, 78.2]
n
107,765,744
mean
17
sd
13.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1077657443.35% 77379
chr1 11116948 4.47% 7573
chr2 8198779 3.39% 6001
chr3 7285996 3.67% 5348
chr4 4253375 2.24% 3343
chr5 4964578 2.73% 3733
chr6 5219317 3.06% 4048
chr7 4889864 3.07% 3686
chr8 3992911 2.75% 3145
chr9 5067994 3.66% 3548
chr10 6140239 4.59% 4403
chr11 5895944 4.36% 3928
chr12 5563849 4.17% 4056
chr13 2382076 2.08% 1813
chr14 3749823 3.50% 2559
chr15 3840937 3.77% 2850
chr16 3832607 4.24% 2639
chr17 5877202 7.06% 3920
chr18 1736413 2.16% 1387
chr19 4470117 7.63% 2812
chr20 3127122 4.85% 2141
chr21 1172271 2.51% 887
chr22 2757499 5.43% 1763
chrX 2229883 1.43% 1796
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77379 210 65232 1392.7 882
global segment-length histogram

Files

Filename Size md5
ENCFF177WNT.bed.gz 1.87 MB 934ffca7865fd8ccb841750597a1e662
ENCFF177WNT.tabix.bed.gz 845.29 KB 18c5fe71b8ad3b02149dc0a30ce7d3f2
ENCFF177WNT.tabix.bed.gz.tbi 232.12 KB 96b5cf22194dc13c5401fe503a70737d
genomic_resource.yaml 1.56 KB 42400b9e0c6f729f7dac23c31c26edf6
statistics/