Resource

Id Histone_ChIP-seq/ENCSR668DIScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR668DIS [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR668DIS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:45.683040+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR668DIS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR668DIS float

Histone_ChIP-seq_ENCSR668DIS
Histone_ChIP-seq ENCSR668DIS [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR668DIS [1.89, 67.9]
n
136,238,264
mean
13.1
sd
10.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1362382644.23% 75256
chr1 13632972 5.48% 7300
chr2 9971429 4.12% 5656
chr3 8047771 4.06% 4639
chr4 5935525 3.12% 3328
chr5 7335719 4.04% 4326
chr6 7073543 4.14% 3821
chr7 6663506 4.18% 3931
chr8 5245187 3.61% 3063
chr9 6827899 4.93% 3539
chr10 7098279 5.31% 3696
chr11 8333130 6.17% 4337
chr12 6851172 5.14% 4016
chr13 3260431 2.85% 1807
chr14 4627413 4.32% 2505
chr15 5053728 4.96% 2746
chr16 4483369 4.96% 2487
chr17 7309814 8.78% 3834
chr18 2711115 3.37% 1541
chr19 5372488 9.17% 2850
chr20 3826872 5.94% 2115
chr21 1450514 3.11% 821
chr22 2902894 5.71% 1532
chrX 2223494 1.42% 1366
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75256 225 123904 1810.33 1103
global segment-length histogram

Files

Filename Size md5
ENCFF925RBS.bed.gz 1.69 MB 8662ce0f88b218e4d233e01e244d8bf1
ENCFF925RBS.tabix.bed.gz 802.09 KB b1f88c23ca863ab9b00e6baeb4549a10
ENCFF925RBS.tabix.bed.gz.tbi 228.17 KB d7c0e507f83c84e3ac1978ff0d29be21
genomic_resource.yaml 1.77 KB 7898e67d0833707a89a4f3451e40dbe6
statistics/