Resource

Id Histone_ChIP-seq/ENCSR667HPTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR667HPT [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR667HPT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo
  • date_created: 2022-05-11T01:55:09.786644+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR667HPT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR667HPT float

Histone_ChIP-seq_ENCSR667HPT
Histone_ChIP-seq ENCSR667HPT [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR667HPT [1.68, 12.2]
n
103,219,774
mean
4.4
sd
1.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1032197743.21% 112936
chr1 9441173 3.79% 10392
chr2 6323719 2.61% 6802
chr3 3216312 1.62% 3822
chr4 3168057 1.67% 3066
chr5 4184555 2.31% 4438
chr6 4448750 2.60% 4683
chr7 4275561 2.68% 4511
chr8 3652489 2.52% 4273
chr9 3975051 2.87% 4160
chr10 5659245 4.23% 6090
chr11 5125910 3.79% 5589
chr12 4472716 3.36% 4737
chr13 2027879 1.77% 2126
chr14 2460607 2.30% 2689
chr15 2936419 2.88% 3481
chr16 4066208 4.50% 4423
chr17 5341799 6.42% 5651
chr18 1853016 2.31% 2173
chr19 5171999 8.82% 5315
chr20 4847901 7.52% 4940
chr21 1642771 3.52% 1669
chr22 3158203 6.21% 3133
chrX 11769434 7.54% 14773
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 112936 185 32139 913.97 624
global segment-length histogram

Files

Filename Size md5
ENCFF126LAW.bed.gz 1.91 MB 66fce07e0e5be3ac75b4dac8e52928b2
ENCFF126LAW.tabix.bed.gz 1.01 MB a5a2d8f0079a79f53fd9bc3d6c7fc68a
ENCFF126LAW.tabix.bed.gz.tbi 183.66 KB ee9f7afd79cca7d69d6570ba5fa49086
genomic_resource.yaml 1.45 KB 1c3dbf1acab7efe4f4a0049b39702505
statistics/