Resource

Id Histone_ChIP-seq/ENCSR662MZXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR662MZX [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR662MZX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:17:54.462409+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR662MZX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR662MZX float

Histone_ChIP-seq_ENCSR662MZX
Histone_ChIP-seq ENCSR662MZX [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR662MZX [1.62, 15.1]
n
73,668,757
mean
4.4
sd
1.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 736687572.29% 89114
chr1 2566369 1.03% 3056
chr2 2635896 1.09% 3226
chr3 1112738 0.56% 1463
chr4 1574291 0.83% 1834
chr5 1892499 1.04% 2073
chr6 2486379 1.46% 2485
chr7 1806455 1.13% 1977
chr8 1477512 1.02% 1870
chr9 1115667 0.81% 1325
chr10 2113417 1.58% 2562
chr11 1217067 0.90% 1552
chr12 1636753 1.23% 1863
chr13 914077 0.80% 1117
chr14 1829735 1.71% 2095
chr15 1596214 1.57% 2073
chr16 1497427 1.66% 1973
chr17 1840850 2.21% 1861
chr18 809001 1.01% 1085
chr19 1386879 2.37% 1644
chr20 1337713 2.08% 1708
chr21 702960 1.50% 981
chr22 548168 1.08% 786
chrX 39569975 25.36% 48503
chrY 715 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89114 165 44824 826.68 578
global segment-length histogram

Files

Filename Size md5
ENCFF370DBB.bed.gz 1.6 MB 7889599eb29472b70d67342a4ab1ccc5
ENCFF370DBB.tabix.bed.gz 845.61 KB a7ca4b52b608570a08f552804b763669
ENCFF370DBB.tabix.bed.gz.tbi 173.67 KB a03970e5c8efe96a42ee268193f8f0fd
genomic_resource.yaml 1.78 KB e55172987b2f5a5c2e437d367b777347
statistics/