Resource

Id Histone_ChIP-seq/ENCSR662BVKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR662BVK [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR662BVK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)
  • date_created: 2021-04-30T04:18:04.879441+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR662BVK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (87 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR662BVK float

Histone_ChIP-seq_ENCSR662BVK
Histone_ChIP-seq ENCSR662BVK [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR662BVK [1.9, 81.6]
n
56,875,510
mean
32.4
sd
18.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 568755101.77% 31822
chr1 5553552 2.23% 3086
chr2 3919092 1.62% 2196
chr3 3399361 1.71% 1788
chr4 2345600 1.23% 1247
chr5 2905848 1.60% 1580
chr6 3343288 1.96% 1886
chr7 2744696 1.72% 1617
chr8 2240388 1.54% 1246
chr9 2273361 1.64% 1329
chr10 2438232 1.82% 1351
chr11 3074220 2.28% 1643
chr12 3046499 2.29% 1636
chr13 1317397 1.15% 767
chr14 1811487 1.69% 981
chr15 1783376 1.75% 1011
chr16 2168550 2.40% 1269
chr17 3087128 3.71% 1713
chr18 1060788 1.32% 611
chr19 3441977 5.87% 2050
chr20 1427500 2.22% 799
chr21 561679 1.20% 334
chr22 1257306 2.47% 725
chrX 1674185 1.07% 957
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 31822 210 25179 1787.3 1355
global segment-length histogram

Files

Filename Size md5
ENCFF180SKE.bed.gz 815.39 KB 59ff844c2b3c65f4fb0f9a0df8f997ca
ENCFF180SKE.tabix.bed.gz 360.49 KB 51015eb9db58a973239a3f63e48b4690
ENCFF180SKE.tabix.bed.gz.tbi 185.0 KB cac5382d3735968ab9f1bc24b8a7b69f
genomic_resource.yaml 1.57 KB e50d5f4e312054f1dca9cd94f09f7786
statistics/