Resource

Id Histone_ChIP-seq/ENCSR660PFNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR660PFN [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR660PFN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (41 years)
  • date_created: 2022-05-11T01:54:15.430627+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR660PFN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR660PFN float

Histone_ChIP-seq_ENCSR660PFN
Histone_ChIP-seq ENCSR660PFN [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR660PFN [1.77, 5.35]
n
3,336,972
mean
3.12
sd
0.53

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 33369720.10% 4977
chr1 401597 0.16% 589
chr2 228566 0.09% 360
chr3 227001 0.11% 336
chr4 95721 0.05% 158
chr5 160606 0.09% 247
chr6 153832 0.09% 226
chr7 101373 0.06% 164
chr8 77684 0.05% 139
chr9 149917 0.11% 210
chr10 137211 0.10% 215
chr11 198924 0.15% 293
chr12 208865 0.16% 299
chr13 43228 0.04% 74
chr14 142370 0.13% 213
chr15 111272 0.11% 176
chr16 147374 0.16% 213
chr17 270971 0.33% 373
chr18 38237 0.05% 62
chr19 175802 0.30% 243
chr20 93530 0.15% 140
chr21 31222 0.07% 43
chr22 115500 0.23% 161
chrX 26169 0.02% 43
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 4977 233 3942 670.48 589
global segment-length histogram

Files

Filename Size md5
ENCFF734MXG.bed.gz 100.63 KB 15f9a966a6a6fb6691cf409c4958eb90
ENCFF734MXG.tabix.bed.gz 52.84 KB 02f2a3e1390ea9d55fb01ff292fa5620
ENCFF734MXG.tabix.bed.gz.tbi 37.28 KB bed6d6c36a5591b6e4146c9ab8d66470
genomic_resource.yaml 1.54 KB b6eb93453715ed0ce16de07b0f8851db
statistics/