Resource

Id Histone_ChIP-seq/ENCSR649FAPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR649FAP [biosample_summary="Homo sapiens chorionic villus tissue embryo (16 weeks)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR649FAP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007106/
  • biosample_summary: Homo sapiens chorionic villus tissue embryo (16 weeks)
  • date_created: 2017-03-22T16:16:47.734997+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR649FAP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR649FAP float

Histone_ChIP-seq_ENCSR649FAP
Histone_ChIP-seq ENCSR649FAP [biosample_summary="Homo sapiens chorionic villus tissue embryo (16 weeks)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR649FAP [1.77, 14.1]
n
52,801,351
mean
5.04
sd
1.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 528013511.64% 61319
chr1 5189198 2.08% 5979
chr2 3409225 1.41% 4390
chr3 2863402 1.44% 3541
chr4 1598461 0.84% 2094
chr5 2422196 1.33% 2990
chr6 1945008 1.14% 2427
chr7 2423850 1.52% 2828
chr8 1441354 0.99% 1876
chr9 2465311 1.78% 2807
chr10 2200616 1.64% 2692
chr11 3018767 2.23% 3340
chr12 3036480 2.28% 3398
chr13 715194 0.63% 1033
chr14 1874194 1.75% 2288
chr15 1810314 1.77% 2238
chr16 2997986 3.32% 3209
chr17 3736362 4.49% 4010
chr18 625406 0.78% 861
chr19 4270917 7.29% 4071
chr20 1867911 2.90% 2077
chr21 626440 1.34% 764
chr22 1857755 3.66% 1879
chrX 397461 0.25% 513
chrY 7543 0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61319 175 14020 861.09 653
global segment-length histogram

Files

Filename Size md5
ENCFF033YUY.bed.gz 1.16 MB fb52a5c7d8ecf61214b31b0b8ae83d03
ENCFF033YUY.tabix.bed.gz 605.88 KB 3421b58dafb97ea3aa5bea0e7d71f55f
ENCFF033YUY.tabix.bed.gz.tbi 127.05 KB 0a122bf91b494269bc7e87bbaa62d727
genomic_resource.yaml 2.0 KB 0f27e2394d64207b249a96093ec3dad1
statistics/