Resource

Id Histone_ChIP-seq/ENCSR645NLLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR645NLL [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR645NLL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000320/
  • biosample_summary: Homo sapiens duodenal mucosa tissue male adult (76 years)
  • date_created: 2015-09-15T19:51:47.771353+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR645NLL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (76 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR645NLL float

Histone_ChIP-seq_ENCSR645NLL
Histone_ChIP-seq ENCSR645NLL [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR645NLL [1.86, 15.3]
n
22,142,437
mean
5.63
sd
2.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 221424370.69% 35485
chr1 2343331 0.94% 3878
chr2 1746175 0.72% 2628
chr3 939413 0.47% 1570
chr4 823026 0.43% 1189
chr5 1185886 0.65% 1856
chr6 1228800 0.72% 1891
chr7 1074431 0.67% 1617
chr8 867595 0.60% 1450
chr9 1093561 0.79% 1698
chr10 1215829 0.91% 1895
chr11 1218127 0.90% 2017
chr12 1048279 0.79% 1637
chr13 473328 0.41% 766
chr14 669503 0.63% 1073
chr15 732279 0.72% 1244
chr16 679967 0.75% 1129
chr17 1589482 1.91% 2428
chr18 292325 0.36% 572
chr19 1099875 1.88% 1775
chr20 962446 1.49% 1658
chr21 225166 0.48% 386
chr22 542337 1.07% 954
chrX 90334 0.06% 171
chrY 942 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35485 170 11025 623.99 452
global segment-length histogram

Files

Filename Size md5
ENCFF214UAG.bed.gz 636.61 KB 7293246e20ad57235d38d4a3169945b1
ENCFF214UAG.tabix.bed.gz 331.93 KB bacf32deaaa5324e1237af871aa32c08
ENCFF214UAG.tabix.bed.gz.tbi 124.28 KB f7c0888a49e99ea753514dab6822557a
genomic_resource.yaml 2.01 KB 817b205c4f244e43ae1a23cf4857c17a
statistics/