Resource

Id Histone_ChIP-seq/ENCSR638FREcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR638FRE [biosample_summary="Homo sapiens OCI-LY3" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR638FRE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006710/
  • biosample_summary: Homo sapiens OCI-LY3
  • date_created: 2014-02-20T05:41:39.517340+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR638FRE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR638FRE float

Histone_ChIP-seq_ENCSR638FRE
Histone_ChIP-seq ENCSR638FRE [biosample_summary="Homo sapiens OCI-LY3" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR638FRE [1.48, 15.8]
n
99,700,089
mean
3.9
sd
1.34

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 997000893.10% 153197
chr1 8263012 3.32% 12958
chr2 7304438 3.02% 11849
chr3 7759569 3.91% 11816
chr4 4525286 2.38% 7449
chr5 3275557 1.80% 5610
chr6 3650972 2.14% 6024
chr7 4692022 2.94% 7417
chr8 3544893 2.44% 5754
chr9 4316458 3.12% 6487
chr10 2100579 1.57% 3856
chr11 5690143 4.21% 8251
chr12 5808001 4.36% 9142
chr13 2932555 2.56% 4621
chr14 3280954 3.07% 5309
chr15 3976040 3.90% 6062
chr16 3960871 4.38% 5936
chr17 3977674 4.78% 6331
chr18 3244203 4.04% 4661
chr19 7338687 12.52% 8891
chr20 3813779 5.92% 5081
chr21 804573 1.72% 1401
chr22 3149494 6.20% 4364
chrX 2102499 1.35% 3624
chrY 187830 0.33% 303
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 153197 150 37092 650.8 467
global segment-length histogram

Files

Filename Size md5
ENCFF266QTP.bed.gz 3.26 MB a6e1fe8ccedf1acfd6a277368979ec5f
ENCFF266QTP.tabix.bed.gz 1.51 MB ff60cceabef6ed53d869d33169cb5561
ENCFF266QTP.tabix.bed.gz.tbi 209.64 KB 0bbbd6d03c3ebf8149e80e50b1684fc1
genomic_resource.yaml 1.88 KB 2b6b71e3a40a5195619ffe2c8581f736
statistics/