Resource

Id Histone_ChIP-seq/ENCSR636FCXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR636FCX [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (33 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR636FCX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002324/
  • biosample_summary: Homo sapiens myoepithelial cell of mammary gland female adult (33 years)
  • date_created: 2015-09-15T20:27:46.288567+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR636FCX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (33 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR636FCX float

Histone_ChIP-seq_ENCSR636FCX
Histone_ChIP-seq ENCSR636FCX [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (33 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR636FCX [1.44, 24.5]
n
44,253,330
mean
6.21
sd
2.88

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 442533301.38% 104162
chr1 3116268 1.25% 6726
chr2 1968452 0.81% 4578
chr3 881213 0.44% 2282
chr4 1378651 0.72% 2877
chr5 1459669 0.80% 3274
chr6 1376000 0.81% 3190
chr7 2072962 1.30% 4370
chr8 1851711 1.28% 4278
chr9 1634132 1.18% 3366
chr10 2275490 1.70% 4820
chr11 1419353 1.05% 3343
chr12 1720797 1.29% 3922
chr13 1035609 0.91% 2440
chr14 1350978 1.26% 2972
chr15 889721 0.87% 2279
chr16 1950045 2.16% 3977
chr17 2143002 2.57% 4216
chr18 606618 0.75% 1545
chr19 2778273 4.74% 5398
chr20 1657017 2.57% 3241
chr21 384465 0.82% 895
chr22 1419044 2.79% 3036
chrX 8882566 5.69% 27129
chrY 1294 <0.01% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 104162 110 12057 424.85 285
global segment-length histogram

Files

Filename Size md5
ENCFF755ZGR.bed.gz 1.77 MB 3fde718c37d8097ee04b903fb4af73c7
ENCFF755ZGR.tabix.bed.gz 950.99 KB 8c76b80a866588ee2dd3e07a7e5f46e5
ENCFF755ZGR.tabix.bed.gz.tbi 235.5 KB f2dbc04ae06bca78e79106b5d01704d9
genomic_resource.yaml 2.06 KB 4fd361f4a53a88b1f91d8857da854446
statistics/