Resource
| Id | Histone_ChIP-seq/ENCSR634UTP |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR634UTP [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"] |
| Description |
status: released biological_replicates: Rep 1 summary: 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR634UTP | float |
Histone_ChIP-seq_ENCSR634UTP |
Histone_ChIP-seq ENCSR634UTP [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"]
|
 |
[1.25, 24.5] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 102318801 | 3.18% | 102684 |
| chr1 | 9954812 | 4.00% | 9965 |
| chr1_KI270709v1_random | 1090 | 1.63% | 3 |
| chr1_KI270712v1_random | 250 | 0.14% | 1 |
| chr1_KI270713v1_random | 310 | 0.76% | 1 |
| chr2 | 7604807 | 3.14% | 7347 |
| chr3 | 5618429 | 2.83% | 5919 |
| chr4 | 3605263 | 1.90% | 3939 |
| chr5 | 4987510 | 2.75% | 5095 |
| chr6 | 4169893 | 2.44% | 4618 |
| chr7 | 5582197 | 3.50% | 6023 |
| chr8 | 5032840 | 3.47% | 4232 |
| chr9 | 4434201 | 3.20% | 4612 |
| chr10 | 5079534 | 3.80% | 5288 |
| chr11 | 4713030 | 3.49% | 4741 |
| chr12 | 4924495 | 3.69% | 4897 |
| chr13 | 2025576 | 1.77% | 2083 |
| chr14 | 2935523 | 2.74% | 3105 |
| chr14_GL000194v1_random | 1507 | 0.79% | 5 |
| chr14_GL000225v1_random | 1042 | 0.49% | 4 |
| chr15 | 3119825 | 3.06% | 3182 |
| chr16 | 5337982 | 5.91% | 4853 |
| chr17 | 6023919 | 7.24% | 6013 |
| chr17_KI270729v1_random | 529 | 0.19% | 1 |
| chr18 | 1697572 | 2.11% | 2033 |
| chr19 | 5394298 | 9.20% | 4563 |
| chr20 | 3168577 | 4.92% | 2791 |
| chr21 | 1389875 | 2.98% | 1250 |
| chr22 | 3355656 | 6.60% | 3239 |
| chr22_KI270733v1_random | 404 | 0.22% | 1 |
| chr22_KI270735v1_random | 341 | 0.80% | 1 |
| chr22_KI270736v1_random | 347 | 0.19% | 1 |
| chrUn_GL000195v1 | 281 | 0.15% | 1 |
| chrUn_GL000216v2 | 935 | 0.53% | 3 |
| chrUn_GL000219v1 | 2328 | 1.30% | 4 |
| chrUn_GL000224v1 | 763 | 0.42% | 2 |
| chrUn_KI270438v1 | 5624 | 5.00% | 7 |
| chrUn_KI270442v1 | 312 | 0.08% | 1 |
| chrUn_KI270744v1 | 814 | 0.48% | 3 |
| chrUn_KI270753v1 | 398 | 0.63% | 1 |
| chrX | 2143577 | 1.37% | 2850 |
| chrY | 2135 | <0.01% | 6 |
| 3325 contigs with no values (126251076 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 102684 | 250 | 89873 | 996.44 | 443 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF441VLZ.bed.gz | 1.93 MB | 65e0d3c0334c7b9f408ebc59396b37cd |
| ENCFF441VLZ.tabix.bed.gz | 990.96 KB | 7ba49593ebcd0dad397cb6a731a4a448 |
| ENCFF441VLZ.tabix.bed.gz.tbi | 159.86 KB | 8852c1203c9d79c6676201a2c1c5cb65 |
| genomic_resource.yaml | 3.12 KB | fb163343d8a68741827a0f43d8ac3e09 |
| statistics/ |