Resource

Id Histone_ChIP-seq/ENCSR630LQOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR630LQO [biosample_summary="Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell originated from blood cell" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR630LQO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000792/
  • biosample_summary: Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell originated from blood cell
  • date_created: 2015-09-15T19:48:50.056960+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR630LQO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR630LQO float

Histone_ChIP-seq_ENCSR630LQO
Histone_ChIP-seq ENCSR630LQO [biosample_summary="Homo sapiens CD4-positive, CD25-positive, alpha-beta regulatory T cell originated from blood cell" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR630LQO [1.86, 16.3]
n
33,834,180
mean
4.89
sd
1.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 338341801.05% 90006
chr1 3751771 1.51% 9889
chr2 3000898 1.24% 8038
chr3 2176349 1.10% 5989
chr4 1581916 0.83% 4274
chr5 2331010 1.28% 6169
chr6 2804510 1.64% 7078
chr7 1663474 1.04% 4362
chr8 1522545 1.05% 4057
chr9 1277042 0.92% 3429
chr10 1841135 1.38% 4847
chr11 1653971 1.22% 4446
chr12 1699502 1.28% 4520
chr13 998789 0.87% 2681
chr14 1234009 1.15% 3313
chr15 1453438 1.43% 3844
chr16 584634 0.65% 1638
chr17 1259960 1.51% 3229
chr18 706473 0.88% 1932
chr19 525507 0.90% 1374
chr20 850555 1.32% 2250
chr21 289584 0.62% 811
chr22 381374 0.75% 1067
chrX 244055 0.16% 763
chrY 1679 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90006 135 5027 375.91 307
global segment-length histogram

Files

Filename Size md5
ENCFF515LUW.bed.gz 1.6 MB 2eecc78dcc8795f0000988137812d9d1
ENCFF515LUW.tabix.bed.gz 839.41 KB 1705f257507a73cdf2f25ec34f18f7ab
ENCFF515LUW.tabix.bed.gz.tbi 249.95 KB 1b5889dea2c96032050f10450fa00f3b
genomic_resource.yaml 2.12 KB 0126864964661031f101b55e20528f33
statistics/