Resource

Id Histone_ChIP-seq/ENCSR629RBCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR629RBC [biosample_summary="Homo sapiens placental basal plate tissue male embryo (38 weeks)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR629RBC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0003013/
  • biosample_summary: Homo sapiens placental basal plate tissue male embryo (38 weeks)
  • date_created: 2017-03-22T16:17:00.106889+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR629RBC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (38 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR629RBC float

Histone_ChIP-seq_ENCSR629RBC
Histone_ChIP-seq ENCSR629RBC [biosample_summary="Homo sapiens placental basal plate tissue male embryo (38 weeks)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR629RBC [1.74, 10.4]
n
13,531,359
mean
4.43
sd
1.14

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 135313590.42% 18030
chr1 1154797 0.46% 1634
chr2 714139 0.29% 1047
chr3 582395 0.29% 860
chr4 384764 0.20% 521
chr5 470867 0.26% 684
chr6 433793 0.25% 613
chr7 675637 0.42% 877
chr8 328767 0.23% 429
chr9 670973 0.48% 869
chr10 446812 0.33% 659
chr11 838566 0.62% 1071
chr12 796768 0.60% 1048
chr13 117645 0.10% 207
chr14 393449 0.37% 602
chr15 360269 0.35% 519
chr16 995355 1.10% 1251
chr17 1105166 1.33% 1389
chr17_KI270730v1_random 589 0.52% 1
chr18 119123 0.15% 189
chr19 1551179 2.65% 1772
chr20 502466 0.78% 664
chr21 191487 0.41% 256
chr22 621470 1.22% 757
chrUn_KI270336v1 331 32.26% 1
chrUn_KI270337v1 713 63.60% 1
chrUn_KI270466v1 1041 84.43% 1
chrUn_KI270467v1 1729 44.11% 1
chrX 68633 0.04% 102
chrY 2436 <0.01% 5
3337 contigs with no values (128957234 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18030 230 12285 750.49 616
global segment-length histogram

Files

Filename Size md5
ENCFF350EBH.bed.gz 347.3 KB eec040d3c61d88853c260d46bea407f6
ENCFF350EBH.tabix.bed.gz 182.45 KB 10e7815186ac6cbbbbe7b06fdf6439cf
ENCFF350EBH.tabix.bed.gz.tbi 74.86 KB 77b7e136228d3208f4d03b8b00f4a90e
genomic_resource.yaml 2.03 KB 818a05c7844fa64b5abe1dd5ab01d813
statistics/