Resource

Id Histone_ChIP-seq/ENCSR627TNGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR627TNG [biosample_summary="Homo sapiens DOHH2" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR627TNG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002167/
  • biosample_summary: Homo sapiens DOHH2
  • date_created: 2014-02-20T05:41:20.326670+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR627TNG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR627TNG float

Histone_ChIP-seq_ENCSR627TNG
Histone_ChIP-seq ENCSR627TNG [biosample_summary="Homo sapiens DOHH2" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR627TNG [1.41, 14.5]
n
25,106,239
mean
3.85
sd
1.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 251062390.78% 41178
chr1 1533826 0.62% 2446
chr2 2007795 0.83% 3336
chr3 1225941 0.62% 2155
chr4 1259585 0.66% 2174
chr5 1263344 0.70% 2265
chr6 1092400 0.64% 1887
chr7 3030689 1.90% 4841
chr8 1150590 0.79% 1882
chr9 706410 0.51% 1152
chr10 977273 0.73% 1614
chr11 829395 0.61% 1419
chr12 1325171 0.99% 2111
chr13 879686 0.77% 1471
chr14 808767 0.76% 1381
chr15 990199 0.97% 1673
chr16 843637 0.93% 1267
chr17 593547 0.71% 873
chr18 537779 0.67% 921
chr19 2274499 3.88% 3351
chr20 413455 0.64% 687
chr21 734331 1.57% 1276
chr22 396698 0.78% 629
chrX 153103 0.10% 248
chrY 78119 0.14% 119
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41178 208 24497 609.7 470
global segment-length histogram

Files

Filename Size md5
ENCFF504GKJ.bed.gz 848.2 KB 0fa9af350546092c4803c7820e360d67
ENCFF504GKJ.tabix.bed.gz 419.99 KB d716f3cac64b22a31c527d0a7c1a4901
ENCFF504GKJ.tabix.bed.gz.tbi 183.94 KB 5f8d23022a2b1176f56b9e9a0eb76bd0
genomic_resource.yaml 2.1 KB 386d304530ac45786473e77be5795a09
statistics/