Resource

Id Histone_ChIP-seq/ENCSR621WQYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR621WQY [biosample_summary="Homo sapiens heart tissue embryo (101 days)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR621WQY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue embryo (101 days)
  • date_created: 2015-09-15T19:51:50.426395+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR621WQY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (101 days)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR621WQY float

Histone_ChIP-seq_ENCSR621WQY
Histone_ChIP-seq ENCSR621WQY [biosample_summary="Homo sapiens heart tissue embryo (101 days)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR621WQY [1.92, 16.8]
n
5,242,281
mean
4.33
sd
0.973

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 52422810.16% 27196
chr1 583241 0.23% 2992
chr2 463564 0.19% 2404
chr3 344785 0.17% 1844
chr4 238752 0.13% 1317
chr5 281677 0.16% 1511
chr6 259014 0.15% 1428
chr7 218815 0.14% 1158
chr8 194153 0.13% 1049
chr9 207542 0.15% 1097
chr10 255751 0.19% 1342
chr11 242297 0.18% 1258
chr12 297908 0.22% 1491
chr13 127473 0.11% 689
chr14 184273 0.17% 940
chr15 218767 0.21% 1131
chr16 163039 0.18% 830
chr17 232188 0.28% 1167
chr18 107833 0.13% 546
chr19 266769 0.46% 1195
chr20 144841 0.22% 727
chr21 51001 0.11% 275
chr22 122236 0.24% 604
chrX 34049 0.02% 187
chrY 2313 <0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27196 105 1828 192.76 168
global segment-length histogram

Files

Filename Size md5
ENCFF342EDT.bed.gz 435.87 KB c3f4fc7b585b11eb3c75042e3caee6c7
ENCFF342EDT.tabix.bed.gz 241.73 KB 5e207d2eafce1fcf51e251692b8845c7
ENCFF342EDT.tabix.bed.gz.tbi 130.89 KB 1a40a4bff5975a3a73bf59f8f97bce81
genomic_resource.yaml 1.95 KB 78acb5acb37aa36b6fdaf623392d6bd5
statistics/