Resource

Id Histone_ChIP-seq/ENCSR621BZDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR621BZD [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR621BZD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue female adult (53 years)
  • date_created: 2016-10-19T23:20:33.975426+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR621BZD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR621BZD float

Histone_ChIP-seq_ENCSR621BZD
Histone_ChIP-seq ENCSR621BZD [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR621BZD [1.65, 5.11]
n
4,693,258
mean
2.71
sd
0.414

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 46932580.15% 10354
chr1 543785 0.22% 1189
chr2 311025 0.13% 708
chr3 227294 0.11% 522
chr4 120250 0.06% 292
chr5 220899 0.12% 490
chr6 203996 0.12% 475
chr7 175331 0.11% 404
chr8 155840 0.11% 360
chr9 262134 0.19% 544
chr10 222332 0.17% 479
chr11 311429 0.23% 671
chr12 203386 0.15% 438
chr13 73689 0.06% 179
chr14 187384 0.18% 392
chr15 172949 0.17% 394
chr16 220714 0.24% 497
chr17 364438 0.44% 772
chr18 89851 0.11% 212
chr19 253666 0.43% 541
chr20 140410 0.22% 299
chr21 51297 0.11% 119
chr22 167660 0.33% 340
chrX 13499 0.01% 37
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10354 235 2869 453.28 389
global segment-length histogram

Files

Filename Size md5
ENCFF281TLC.bed.gz 200.71 KB 59e331200b09a7cd5df43adf9dac53a8
ENCFF281TLC.tabix.bed.gz 108.62 KB 71ce9b7ca6545d89205f211aa8f0ea52
ENCFF281TLC.tabix.bed.gz.tbi 70.51 KB 363a19c5a88d52be0b616108091e43c5
genomic_resource.yaml 1.73 KB c0c25e05e1b3935555f303b6b3df3b18
statistics/